Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00025 ATGATTCCAGTGATCATCATTGGATTTAATCCAATGATGAAGAAGAGGCAGGTCGTTGTGAAGAGAGATGTGGCCAAGACGTCGTCGTCGGTGATGAGGAACGTCAGATATTTGGAGTGCCAGAAGAATCACGCGGCCAACATCGGAGGTTACGCCGTCGATGGTTGCAGAGAGTTCATGGCCAGTGGTGATGACGTCACAGCCGGGGCTCTTACCTGTGCTGCTTGCGGCTGTCACAGGAATTTCCACAGAAGAGAAGTTCAGACCGAGGTTGTCTGTGAGTACTCTCCTCCTAATTCCGCTCGCTAA 309 0.5113 MIPVIIIGFNPMMKKRQVVVKRDVAKTSSSVMRNVRYLECQKNHAANIGGYAVDGCREFMASGDDVTAGALTCAACGCHRNFHRREVQTEVVCEYSPPNSAR 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00025 102 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 36 87 IPR006456 -
Pral4210g00025 102 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 37 86 IPR006456 -
Pral4210g00025 102 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 90 - -
Pral4210g00025 102 Pfam ZF-HD protein dimerisation region 34 87 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00025 Pral-Chr4210 125246 125974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00025 13 100 Zinc finger-homeobox gene family AT1G18835 78.652 1.48e-43 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pral4210g00025 ZF-HD_dimer 1.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00025 - - rcu:8263435 164.851