Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00024 ATGGGAAGGCCACCTTGCTGCGACAAAGTTGGGATCAAGAAGGGCCCTTGGACTCCCGAAGAAGACATAATTTTGGTGTCTTATATTCAAGAACACGGACCCGGCAATTGGAGATCTGTTCCCACTAACACAGGTCTCATGAGATGCAGTAAAAGTTGCAGACTCAGATGGACCAACTATCTTCGTCCTGGTATCAAGAGAGGCAACTTCACCGATCACGAGGAAAAGATGATCATCCATCTCCAAGCTCTGCTCGGCAACAGATGGGCTGCTATAGCTTCGTATCTCCCACAGAGGACGGACAATGACATAAAGAATTATTGGAACACCCATTTGAAGAAGAAGATGAAAAGGCTTCAGACTGGGACGGAAGGTGACGACGAAGAAGACGACTCGTTCTCACAGCCCAAGGGCCAGTGGGAGAGAAGGCTTCAAACGGATATCCACATGGCCAAACAGGCTTTGTGCGAGGCTCTGTCTCTGGACAAGCCAACTGAGACCGAAAACAAGCCCCCCAATCCCACAGTCCAAACATCCCCTTACGCATCAAGCACCGAAAACATAGCCCGATTACTCCAGAACTGGATGAACAAATCCCCAAAGAACCCAACACAACAAACAAATTCACCGCCAGGACCCCGCTTCATCAACTCGGGCACATCAGGTTCCAGTTCGTCCGGCGAAACAGCGACATATAATAGCAGTAGTAACAACACTGTGCTAGATTCTGTATGGAGCTTCAAGTCTGATACTTCTCAACAATCTGGGTCTGTGGACGACAACACCATCAACAGTATGTTCCAAGACGAAACCAAGCCGAGCTCGGAGTCGCAGCTTCCTCTGACTCTAATCGAGAATTGGCTCTTCGATGATGGGGTAGCTCAGAACCAGGATGACCTGATCAACGACTCGGTCCTTCTGGAAGAAACTAGTCCACAATTGTTCTGGAAGAAAACTTAA 960 0.4865 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKMKRLQTGTEGDDEEDDSFSQPKGQWERRLQTDIHMAKQALCEALSLDKPTETENKPPNPTVQTSPYASSTENIARLLQNWMNKSPKNPTQQTNSPPGPRFINSGTSGSSSSGETATYNSSSNNTVLDSVWSFKSDTSQQSGSVDDNTINSMFQDETKPSSESQLPLTLIENWLFDDGVAQNQDDLINDSVLLEETSPQLFWKKT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00024 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4210g00024 319 CDD SANT 69 112 IPR001005 -
Pral4210g00024 319 MobiDBLite consensus disorder prediction 197 235 - -
Pral4210g00024 319 CDD SANT 16 61 IPR001005 -
Pral4210g00024 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral4210g00024 319 MobiDBLite consensus disorder prediction 166 183 - -
Pral4210g00024 319 Gene3D - 13 66 - -
Pral4210g00024 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pral4210g00024 319 MobiDBLite consensus disorder prediction 163 183 - -
Pral4210g00024 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4210g00024 319 FunFam Transcription factor MYB30 68 126 - -
Pral4210g00024 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pral4210g00024 319 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral4210g00024 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4210g00024 319 FunFam MYB-related transcription factor 13 66 - -
Pral4210g00024 319 Gene3D - 68 139 - -
Pral4210g00024 319 SMART sant 13 63 IPR001005 -
Pral4210g00024 319 SMART sant 66 114 IPR001005 -
Pral4210g00024 319 MobiDBLite consensus disorder prediction 119 140 - -
Pral4210g00024 319 MobiDBLite consensus disorder prediction 250 278 - -
Pral4210g00024 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00024 Pral-Chr4210 107750 109410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00024 1 291 MYB Transcription Factor Family AT5G62470 50.867 3.36e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4210g00024 Myb_DNA-binding 9.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00024 K09422 - gmx:100807020 407.142