Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00016 ATGGAGGGTGGTGATGAACTCCACCACCACCACCACCAACATCACCGTCCCACCTTCCCATTTCGGCTCCTCGAGAAGAAGGAAGATCATCAAGAGCCTGCTTCTTGTTCTACTTCTTCCTCTTACCCTTCCCTAGCCATCTCCGCCGAACCCACCACCTCCAATTCCAACCGATCCAACCAGCTCCTTAACGTCGTCCCTCCCACCTCTTCCTCCTCCGAGCCCTCCAATAAGAAGCCCCCACCCAAGAGAACTTCCACCAAGGACCGCCACACCAAGGTCGACGGTCGTGGTCGCCGTATCCGAATGCCCGCTCTGTGTGCTGCTCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCATAAGTCCGATGGGGAAACCATCGAGTGGCTGCTCCAACAGGCTGAGCCCGCCGTCATCGCTGCCACAGGAACAGGAACGATTCCCGCAAATTTCACTTCGCTTAATATTTCGCTGAGAAGCTCCGGCTCCACCATGTCCGTCCCTTCTCAGCTCAGATCGTCTTACTTCAATCCCAACTTCTCAGTTCAGCAGCGGAGAAGCTTCTTCCCCGGAATCGGCTTGTCTTCTGATGGCAACAACACCTCAACGCTTCTGAATTTTCAGTCTAACAGTTTCTGCGGCAGTAGTATGTTGCAAGCAAAGCAGGAGTTGCGCGGAGGCGAGGGAGGTGTCCAGTCCTCCTCGACGACGTTGGATTTGACGGAGGCGGAAGAAAGTATGGCGAGGAAAAGGCGAACGACGGAGCAAGAGTTGTCGCCATCTACTTCAGCACAGCAATATCAAATGGGAAGTTACTTGTTGCAATCGAGCGCGGGGGCGATTACGACGAGCCACGCACAGATTCCGGCAAATATATGGATGGTGGCGAATTCGAATAATCAAGTTGTGAGCGGGGATCCTATATGGACATTTCCGTCGGTGAACAATAGCGCTCTGTATAGAGGCCCTACCATGTCCAGTGGGTTGCATTTTATGAACTTCCCTACTCCTATGGCGTTGTTGCCTGGTCAACAATTAGGGTCGTCTGGGATTGGTGGCGGCGGAGCTGGGAATATAAATGAGGGACATTTAAGTATGCTTGCCGGCGTCAGCCCATACCGGCCAGTGAGTGGTGTTACGGAGTCTCAGGCAAGTGGGTCTCAATCACACCATGGTGGGGGTGGTGGTGGGGGAGGAGGAGGCGGCGATGATCGACATGATACAAACAGTCACCGCTCCTAG 1242 0.5451 MEGGDELHHHHHQHHRPTFPFRLLEKKEDHQEPASCSTSSSYPSLAISAEPTTSNSNRSNQLLNVVPPTSSSSEPSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSFFPGIGLSSDGNNTSTLLNFQSNSFCGSSMLQAKQELRGGEGGVQSSSTTLDLTEAEESMARKRRTTEQELSPSTSAQQYQMGSYLLQSSAGAITTSHAQIPANIWMVANSNNQVVSGDPIWTFPSVNNSALYRGPTMSSGLHFMNFPTPMALLPGQQLGSSGIGGGGAGNINEGHLSMLAGVSPYRPVSGVTESQASGSQSHHGGGGGGGGGGGDDRHDTNSHRS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00016 413 MobiDBLite consensus disorder prediction 1 100 - -
Pral4210g00016 413 MobiDBLite consensus disorder prediction 228 242 - -
Pral4210g00016 413 MobiDBLite consensus disorder prediction 81 100 - -
Pral4210g00016 413 MobiDBLite consensus disorder prediction 375 413 - -
Pral4210g00016 413 MobiDBLite consensus disorder prediction 376 390 - -
Pral4210g00016 413 MobiDBLite consensus disorder prediction 34 80 - -
Pral4210g00016 413 ProSiteProfiles TCP domain profile. 87 141 IPR017887 -
Pral4210g00016 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 391 IPR005333 GO:0003700
Pral4210g00016 413 MobiDBLite consensus disorder prediction 223 264 - -
Pral4210g00016 413 MobiDBLite consensus disorder prediction 18 33 - -
Pral4210g00016 413 Pfam TCP family transcription factor 85 256 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00016 Pral-Chr4210 73172 74959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00016 78 345 TCP Transcription Factor Family AT3G47620 48.788 4.51e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4210g00016 TCP 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00016 - - vvo:131635423 495.738