Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00003 ATGGGCAAGTCACCAGGAAAATGGATCAAAACTGTACTATTTGGAAAAAAGTCATCCAAATCAAATATTTCCAAAGGGAGAGAGAAACTTGTTAACCGGAAAGAAACATTGGTTGCTTCCAAGGCATCAGAAACTGGTGTGGCTTTAGAACCGCCCCACAATGTTGTTGCCAGGAAGGAGGAAGAATTGGAATTGGAGAATAAAGAAGCAGAAAATCTTCCTCCTCTGAATCAGGAAACGGATTTGGTGTCACATGTTGATGAAGATGTGCCCCCTGATCCGGAGAAAATTAGGCAGGAGGAAGCTGCAACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGGATAATAAGATTGCAAGCACTTATTCGTGGGCACTTGGTTCGAAGACAAGCTGTTGCTACATTATGTTCTATGTATGGGATAGTCAAATTTCAGGCACTTGTTCGTGGAGGGAGGGTTAGACAGTCTCATGCTGGTTTTGAAATCCATGAGAAGTACAATATTTTGAAGCTTCAGTATGGAAAGCATGCCAATCCAGTTGATGTAGCCACAAAATTTGCAAAGTTATTGACAAATACTTACACTCGCAAGCTTCTTGCATCATCTACTACGATAATGGCCTTGCGCCTGCAATATGTTCCTGGTGATCCAAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCTGCATCTCACTTTTGGATACCGATTCCCCAACCCAAGAAAATTCCAGAATCCAGGTCTCAGAGAAAGCAAGGTAATACTTCAACTGGAGAAGTTCAAATGAGCAAGTCAAGACGTACTACTCGGAAGCTTCCAACTGCAAGTTCTGACTCAGTCTCAGTACAAGCAAATCCTGAATTTGAGAAACCAAAAAGGAATCCGAGGAAAATATCAAACCAAGCTACAGATCCAGTGCAAGAAAATCCACAAAGTGAGCTCGAAAAGGTTAAGCGGAGCCTGAGAAAGGTCCATAACCCTGTTGTTGAGAATGCTGTTCCACCAGAAGTTGAGTCTGAGACCCCAAAACAGCACCTGGAGAAGGCAAATATTACCTCAGGACATGTTGCTTCAGAGCCCGAGGCTGTTAGCACTAATGAAATATCTAACAAAGAATCAGCATTGGCTGAGCCTGTGCCCAATGTGCCTGATGTGGAAATTATTCCTAGACCTTCGGTTAGCAAGGAGGTGTCAGAAATGTCAGGCAGCTATCACTTGGAATTGGATCCAAAGCCCTTTGTAGAGAATACAACTAAAGATAAAAATCCTTCTGGTGATGGAGTTTCAAATGAGCCAAAAGATCTACCAGAGAGTGGATGTAAAGATGAGAATTCTCCCCTAACTAATGGGGATCTGAGTCATGAGGAAGATCCAACAGGCAATGAAAACCAGAGACCGTCCCGGCGGGCCTCAGTTCAAGGGAAACAGGAACGTGCAGAGAATGGTATCCAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACCGAGTCAGCCAAGGCCAAGTTGAGGGCACAAGGATCGCCAAGGTTTGGACAAGATGGTGGCGAGAGAAACAACTCTGCTCGGCGACATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCAAGGACCCAGAGACCGGTTCAACTGGGCAGCAAAGGGGGGCACAAAACTGCCTCATCTAGAGATGGAAATGGAAGAGTAATTCAAGCTGAGTGGAGGAGGTGA 1749 0.4477 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNRKETLVASKASETGVALEPPHNVVARKEEELELENKEAENLPPLNQETDLVSHVDEDVPPDPEKIRQEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQALVRGGRVRQSHAGFEIHEKYNILKLQYGKHANPVDVATKFAKLLTNTYTRKLLASSTTIMALRLQYVPGDPNSVLSWLERWSASHFWIPIPQPKKIPESRSQRKQGNTSTGEVQMSKSRRTTRKLPTASSDSVSVQANPEFEKPKRNPRKISNQATDPVQENPQSELEKVKRSLRKVHNPVVENAVPPEVESETPKQHLEKANITSGHVASEPEAVSTNEISNKESALAEPVPNVPDVEIIPRPSVSKEVSEMSGSYHLELDPKPFVENTTKDKNPSGDGVSNEPKDLPESGCKDENSPLTNGDLSHEEDPTGNENQRPSRRASVQGKQERAENGIQSSPTLPSYMAATESAKAKLRAQGSPRFGQDGGERNNSARRHSLPSSTNSKISSHSPRTQRPVQLGSKGGHKTASSRDGNGRVIQAEWRR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00003 582 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Pral4210g00003 582 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Pral4210g00003 582 Coils Coil 53 73 - -
Pral4210g00003 582 MobiDBLite consensus disorder prediction 320 334 - -
Pral4210g00003 582 SMART iq_5 98 120 IPR000048 GO:0005515
Pral4210g00003 582 SMART iq_5 121 142 IPR000048 GO:0005515
Pral4210g00003 582 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Pral4210g00003 582 MobiDBLite consensus disorder prediction 366 381 - -
Pral4210g00003 582 PANTHER IQ-DOMAIN 5-RELATED 1 544 - -
Pral4210g00003 582 MobiDBLite consensus disorder prediction 61 93 - -
Pral4210g00003 582 MobiDBLite consensus disorder prediction 531 555 - -
Pral4210g00003 582 MobiDBLite consensus disorder prediction 258 293 - -
Pral4210g00003 582 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Pral4210g00003 582 MobiDBLite consensus disorder prediction 486 502 - -
Pral4210g00003 582 MobiDBLite consensus disorder prediction 248 582 - -
Pral4210g00003 582 Pfam Protein of unknown function (DUF4005) 484 562 IPR025064 -
Pral4210g00003 582 Gene3D - 96 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00003 Pral-Chr4210 12921 18607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00003 1 582 IQD Protein Family AT1G74690 44.046 3.92e-124 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00003 - - gmx:100794636 789.645