Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00077 ATGACCGAAAATATTACTTTCTTCAATTGTTCTTCGGCTGTTTCGAGATATACGCGCGAGTCCTGCCCAATTCTTGCCCTTGGCTCTGATGACAGTGTCCTGTCCGGGGACCTACTTTCCTGCATTATGATGTTTCGGTTAGATTCGCCCATACCGGCAGCGTCTTTTCGGAGGAACTCGATACCACTCAAAATTGAAAAGCATAAAACCAGCAAGATGCTCAGAATTGTTTTGCCCGGAACAGGTTCGATTGTGCTGGTTTTGCTGTCGGTCGTGTGCGTTTACACATGTCGCTACTTCAAGAAGAAAGGAGATGATCAAGCAAGACTTGAAAAGTTTTTGAAGAATTACGAGGCACTTAAACCTACCAGATTCTCTTTCGCTGATATCAAAAGAACCACACACAGTTTCAAGGATAAATTAGGTGAAGGTTCTCACGGAACAGTCTTTAAAGGCAAGCTATCTGCTAAAATTCAAGTTGCTGTCAAAGTACTGAATAATTCAGATAATGATGGACAAGATTTCATCAACGAAATGGGGACAATGGGCCAAATTCATCACGTCAATGTTGTTCGTTTGTGGGGATTTTGTGCTGATGGTTTTCATCGAGCTCTTGTTTATGACTTTTTCCCAAAAGGCTCCCTCCAAAAGTTCATATTTTCCCAAGATAACAGAGAAAATTTCCTCGGGTGGTCGAAGCTGCAACAGATTGCTCTTGGCATCGCAAAAGGGATTGAATATCTTCACCAAGGCTGTGATTATAGAATTCTCCATTTTGATATCAATCCTCACAATGTGTTGTTAGATGACGAGTTCACCCCTAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCTAAAAATCAAAGTATGGTGTCAATGACAATAGCAAGAGGAACTTTAGGATATATTGCACCTGAAGTCTTTTTTCCAAATTTTGGCCATGTGTCATACAAATCAGATATTTATAGTTATGGGATGCTACTCTTGGAAATGATCAGTGGAAGGAAAAATGTTGATACAAACAAAGAAACTTTTCAAGTTCTATATCCAGAATGGATTCATAATTTGATCAAAGGAGAAAACATGAGTATTTCTATAGAAGATTAG 1110 0.391 MTENITFFNCSSAVSRYTRESCPILALGSDDSVLSGDLLSCIMMFRLDSPIPAASFRRNSIPLKIEKHKTSKMLRIVLPGTGSIVLVLLSVVCVYTCRYFKKKGDDQARLEKFLKNYEALKPTRFSFADIKRTTHSFKDKLGEGSHGTVFKGKLSAKIQVAVKVLNNSDNDGQDFINEMGTMGQIHHVNVVRLWGFCADGFHRALVYDFFPKGSLQKFIFSQDNRENFLGWSKLQQIALGIAKGIEYLHQGCDYRILHFDINPHNVLLDDEFTPKISDFGLAKLCSKNQSMVSMTIARGTLGYIAPEVFFPNFGHVSYKSDIYSYGMLLLEMISGRKNVDTNKETFQVLYPEWIHNLIKGENMSISIED 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00077 369 Gene3D Phosphorylase Kinase; domain 1 109 209 - -
Pral4209g00077 369 PANTHER RUST RESISTANCE KINASE LR10-RELATED 109 361 IPR045874 GO:0004672
Pral4209g00077 369 FunFam Os07g0541700 protein 210 300 - -
Pral4209g00077 369 ProSiteProfiles Protein kinase domain profile. 135 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4209g00077 369 FunFam serine/threonine-protein kinase PBS1-like 103 209 - -
Pral4209g00077 369 Gene3D Transferase(Phosphotransferase) domain 1 210 369 - -
Pral4209g00077 369 ProSitePatterns Protein kinases ATP-binding region signature. 141 163 IPR017441 GO:0005524
Pral4209g00077 369 Pfam Protein tyrosine and serine/threonine kinase 137 340 IPR001245 GO:0004672|GO:0006468
Pral4209g00077 369 SUPERFAMILY Protein kinase-like (PK-like) 119 354 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00077 Pral-Chr4209 670745 671969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00077 62 368 Receptor kinase-like Gene Family AT1G66910 43.574 6.32e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4209g00077 PK_Tyr_Ser-Thr 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00077 - - tpra:123893290 459.144