Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00076 ATGTTGAGCGCCGATCTTCCTGAAGAAATTGTGGAGGAGATATCGATGAGGCTTCCTGTGAAATCCCTACTTCGATGCAAATCCGTGGCGAAATCCTGGTACGCACAAATCACTAATCCATCTTTTATAACTAGACAATTTGAATGGTCTGATTCAATCACCAAAAACCGCCGCCACCAGCTGATATTTCGATTGCACAATGCCTCTCTGAAGCCTTGCATTTCTCTAATTTCCGACCTGGAACCCATCGATATAGAAGTGCCGTTTCCTGAGAAGGATGTGGAATACATATTTGTTTATGGTCAATGTAATGGGATTTTCTGTCTCTATGGGGTCTATGGAGGAGACAAAGCTGGTGAGGCCAGCTTGATTCTGTGGAATCCTGGAACAAAAGAGGTGAAAGTTCTTCCTGCATCTCAGAACCAACCCAGAGACATGGTTTATATCATATATGGGTTTGGAATTGATCCTATTACAAACGATTACAAGGTTGTTCGATTTGGGAACCTGGCTTTTGAAGGAAGAGAACAACCTCCAGTTGAGGTGTATAATCTCAGTACTGGTTCTTGGAGAACCATAGATTCTGTTGTCCCTGCTTTTCGATTGTGTTATCCAAGATGCAGGGCTTATCTGAATGGGTTTTATCACTGGCTAACTGAAGATAATAATGATAAGGCCATTTTGTTCTTTGATTTCGGCAACGAGGTGTTTGGGAAGATTCAGTTGCCTCCTGAAATTGATCAATCTTATGAATCAAATGTTGCTGTGGTTGATGAGAAACTTGCTTGTGCTGCTACATATAAGATGACCAATTGTAGATATGAAATCTGGGTGATGAATGAGTATGGTGTTGAGAGTAGCTGGAGTAAGAAATTTGTTATTGGACCAAACCCAGAATTTGGATCATTTTTAGGATTTTGGGGAGATGATGAGATTCTTGTTGAAAATGAAGGTCATTTGGTTTCATATAATATTAAGAATCAGAAGATACAGAGGCTCGAAATCCATGGAGTTCCAAAACTGTTCAAAGTGTTTGATTATTTGGAAAGCTTGGTTTCTTTGAAGTCTTGA 1071 0.4006 MLSADLPEEIVEEISMRLPVKSLLRCKSVAKSWYAQITNPSFITRQFEWSDSITKNRRHQLIFRLHNASLKPCISLISDLEPIDIEVPFPEKDVEYIFVYGQCNGIFCLYGVYGGDKAGEASLILWNPGTKEVKVLPASQNQPRDMVYIIYGFGIDPITNDYKVVRFGNLAFEGREQPPVEVYNLSTGSWRTIDSVVPAFRLCYPRCRAYLNGFYHWLTEDNNDKAILFFDFGNEVFGKIQLPPEIDQSYESNVAVVDEKLACAATYKMTNCRYEIWVMNEYGVESSWSKKFVIGPNPEFGSFLGFWGDDEILVENEGHLVSYNIKNQKIQRLEIHGVPKLFKVFDYLESLVSLKS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00076 356 Gene3D - 3 45 - -
Pral4209g00076 356 SMART fbox_2 6 45 IPR001810 GO:0005515
Pral4209g00076 356 PANTHER OS09G0372900 PROTEIN-RELATED 6 310 - -
Pral4209g00076 356 NCBIfam F-box protein interaction domain 101 314 IPR017451 -
Pral4209g00076 356 Pfam F-box domain 5 42 IPR001810 GO:0005515
Pral4209g00076 356 CDD F-box_AtFBW1-like 4 42 - -
Pral4209g00076 356 Pfam F-box associated 210 338 IPR006527 -
Pral4209g00076 356 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Pral4209g00076 356 SUPERFAMILY Galactose oxidase, central domain 111 291 IPR011043 -
Pral4209g00076 356 SUPERFAMILY F-box domain 5 67 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00076 Pral-Chr4209 660363 661480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00076 181 304 Carbohydrate Esterase AT1G25141 27.407 3.67e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00076 - - pcin:129320976 598.586