Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00071 ATGGAAGACGTTCGGGTGGACAAGGAGGAGGAGGAGGAGGTGGGACCCATGGTTGGGGGAGAAGAGGAAGGAGAGGCAGGTTCGAGCTTAACGATGGAGAGGGTGGCTGTCGCCAAGAAGTTCATCGAAAACCATTACAAAGCCCAGATGAAGCTCATACAAGATCGCAAAGAGAGGCGTTCAGTGCTGGAAAAGAAGTTAGCATCTTCTCATGTACCAGAAGAAGAACAGATGCATCAACTGAAAGATTTAGAGCGCAAGGAGACTGAGTATATACGGTTAAAACGACACAAAATATGTGTCAGTGATTTTAACCTTCTTGATATTATTGGGAGGGGAGCCTTTGGAGAGGTAAGACTTTGTCGTGAGAAGAAATCAGGCAATATTTATGCCATGAAAAAGTTGAGAAAGTCTGAGATGCTCAGTAGGGGGCAGGTTGAACATGTCAGAGCTGAGCGGAACTTATTAGCAGAAGTTGCGAGTCATTGCATTGTGAAACTCTATTACTCCTTTCAGGATGCTGATTATTTATATCTGATAATGGAATATTTACCGGGTGGTGATTTAATGACTTTGCTGATTAGAGAAGAAACCTTGACTGAAAGTGTGGCTAGATTTTACATCGCTCAAAGCGTTTTAGCCATAGAATCTATTCATAGACATCATTACATTCATCGTGATATAAAACCTGACAACCTTCTTTTGGACAAAAATGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCACTTGATTGCACAAATTTATCATCAATAAATGAGGGCGAAGTCTTAGATGACGAGAACTTGAGTGATACCATGGACATTGATGAATCCTTACCAAATTCTAAATGTGGACGGCGCTGGAAAAGTCCCCTTGAACAACTTCAGCACTGGCAAATAAATAGGAGGAAGTTGGCATTTTCCACAGTTGGAACTCCAGACTATATTGCTCCTGAAGTGTTGCTTAAAAAGGGATATGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATCATGTATGAGATGCTTGTTGGTTATCCCCCGTTTTACTCTGATGATCCAGTAACAACATGTAGAAAGATTGTACATTGGAAACATCATTTAAAATTTCCAGAGGAGGCAAGGCTGACACCTGAGGCAATGAATCTAATTTGTAGGTTGCTCTGTGATGCTGACCGAAGACTTGGAACTAGAGGGGCAGATGAAATTAAAGCACATCCTTGGTTCAAAGATGTTGTATGGGATAAACTCTACGAAATGGAAGCAGCATTCAAACCACAAGTCAATGGAGAGCTTGACACACAGAATTTTATGAAATTTGATGAGGTTGAGCAACCAAAACCAACTAGAATTGGATCTGGTCCCATCAGAAAGATGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGAATTTTGATGCTGTCAAAGGCATGCATCATACTATGGGTACGTGA 1473 0.4134 MEDVRVDKEEEEEVGPMVGGEEEGEAGSSLTMERVAVAKKFIENHYKAQMKLIQDRKERRSVLEKKLASSHVPEEEQMHQLKDLERKETEYIRLKRHKICVSDFNLLDIIGRGAFGEVRLCREKKSGNIYAMKKLRKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDLMTLLIREETLTESVARFYIAQSVLAIESIHRHHYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTNLSSINEGEVLDDENLSDTMDIDESLPNSKCGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKHHLKFPEEARLTPEAMNLICRLLCDADRRLGTRGADEIKAHPWFKDVVWDKLYEMEAAFKPQVNGELDTQNFMKFDEVEQPKPTRIGSGPIRKMLLTPQDLSFVGYTYKNFDAVKGMHHTMGT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00071 490 ProSiteProfiles Protein kinase domain profile. 104 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4209g00071 490 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Pral4209g00071 490 FunFam Non-specific serine/threonine protein kinase 430 440 - -
Pral4209g00071 490 CDD STKc_NDR_like 102 476 - -
Pral4209g00071 490 Gene3D Transferase(Phosphotransferase) domain 1 188 255 - -
Pral4209g00071 490 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 443 - -
Pral4209g00071 490 Gene3D Phosphorylase Kinase; domain 1 430 440 - -
Pral4209g00071 490 CDD MobB_NDR_LATS-like 38 99 - -
Pral4209g00071 490 FunFam Non-specific serine/threonine protein kinase 188 255 - -
Pral4209g00071 490 Gene3D Phosphorylase Kinase; domain 1 63 187 - -
Pral4209g00071 490 Gene3D Transferase(Phosphotransferase) domain 1 310 429 - -
Pral4209g00071 490 MobiDBLite consensus disorder prediction 1 29 - -
Pral4209g00071 490 MobiDBLite consensus disorder prediction 1 19 - -
Pral4209g00071 490 FunFam Non-specific serine/threonine protein kinase 65 187 - -
Pral4209g00071 490 FunFam Non-specific serine/threonine protein kinase 310 429 - -
Pral4209g00071 490 SUPERFAMILY Protein kinase-like (PK-like) 87 459 IPR011009 -
Pral4209g00071 490 SMART serkin_6 104 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4209g00071 490 Pfam Protein kinase domain 304 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4209g00071 490 Pfam Protein kinase domain 105 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4209g00071 490 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral4209g00071 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Pral4209g00071 490 SMART pkinase_C_6 412 477 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00071 Pral-Chr4209 585246 594875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00071 1 489 AGC Kinase Gene Family AT4G33080 75.306 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pral4209g00071 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00071 K08790 - jre:109009023 842.802