Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00068 ATGCAAAGCAAGGCTATGGAGGAAATATCCTCTACTGTTGCAGTGCCATTTACACTTGGGAAGTTGACTCAGGAGTCATCAGTAACAACCCACATGGAGATATCTGGGTTGAAGCTTATGGCTAATACAGCAGCTTTGATTTTGAATCCTGCAATGGGGGATTGTGAAAATCAAAGGGGTTTAAGTTCACAACATCAGATTACTGTATCTGCAGAAAAAAAGGAGAATCAAGTTGGAGATGCTCTTGTGTCAGATTTGACTATTGAACGTCACAGAAGATGGATTGGGAATGAAACCAACAATCAGAAAAGCGACGATGATGATTTTCATTGTCCAAATGATTCAAGCTCTCAAATTGTTGCAGGGGACCAATCTTCAACTTTAAGAACTAATTGTTCTGAGATTGATCCACCAATTAGTACCATCGAGGTTGAAGAACATATAGCACTAAAGCCAGTGCAGAAAGTGGTCTCTGTTGAAGTGGATATTGAGATTTATGATGGCAGCGGATCAGATGGGTGTGATTCTAAACCATCAGATTCGCTTCTTGCGATGTCAGAGGAGAAAATATGCAGGAGCCACCCGAATGGATTAGAAATGAATAGTGGGGCCCTTTGGGGATTTTCATCAATCTGTGGAAGGAGAGATGAGATGGAAGATGCTATTGCAGTTGAGCCTCAATTCTTGCAAGTTCCTTCACAGATGCTAATGGAAAACCATGTGACTGAAAACCCAAGATACTCAGAAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGATGCCAGGTTGCTAACTACTGTCGGGAACGTCTCCATTCAGTGTTGATTGAGGAGCTAGATGCTGCCAGAACAAGCTTGGGAGACAACTGGCAGGAGCACTGGAGGAAAGCATTCTGCAAGTGTTTCCAGAAAGTTGATGATGAAGTTGACGGAAAAAGTGAAGCTAATAATGAAGATAACAATCATGGATCTAAGCCTAGCTCTGAACCTCTTGCTCCTGAAACTGTTGGTTCTACTGCAGTGGTAGCCATTTTAAGTCAAACCCACATAATAGTGGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGTCGCGGAAAAGAAGCCATTCCATTGTCTACTGACCACAAACCAAATAGGGATGATGAGTGGGCAAGAATAGAAGCTGCAGGAGGAAGGATTATACAGTGGAATGGGTACAGAGTTCTAGGGGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGATATTTGAAACCATGGATAATTCCTGAACCAGAAATAGAGTTTATCCTTAGAGAGAAAAATGACGAGTGCCTTATTATAGCCAGTGATGGTCTATGGGATGTCATGACAAATGAAGAAGCCTGCCAGGCTGCAAGAAACAGGATTCTTCTTTGGCACAAAAAGTATGCCAATGGCAACAACAAAGGATCTGCTGAACAAGATCCTGCAGCTCAGTTTGCTGCAGAGTATCTATCCAGACTTGCCCTTCAAAGGGGAAGTAAAGATAACATATCTGTTATTGTGGTAGACTTGAAGGCACAAAGAAAATTTAAGACAAAGGCATAA 1569 0.4238 MQSKAMEEISSTVAVPFTLGKLTQESSVTTHMEISGLKLMANTAALILNPAMGDCENQRGLSSQHQITVSAEKKENQVGDALVSDLTIERHRRWIGNETNNQKSDDDDFHCPNDSSSQIVAGDQSSTLRTNCSEIDPPISTIEVEEHIALKPVQKVVSVEVDIEIYDGSGSDGCDSKPSDSLLAMSEEKICRSHPNGLEMNSGALWGFSSICGRRDEMEDAIAVEPQFLQVPSQMLMENHVTENPRYSEAHFFGVYDGHGGCQVANYCRERLHSVLIEELDAARTSLGDNWQEHWRKAFCKCFQKVDDEVDGKSEANNEDNNHGSKPSSEPLAPETVGSTAVVAILSQTHIIVANCGDSRAVLCRGKEAIPLSTDHKPNRDDEWARIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEIEFILREKNDECLIIASDGLWDVMTNEEACQAARNRILLWHKKYANGNNKGSAEQDPAAQFAAEYLSRLALQRGSKDNISVIVVDLKAQRKFKTKA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00068 522 MobiDBLite consensus disorder prediction 113 131 - -
Pral4209g00068 522 CDD PP2Cc 207 512 IPR001932 -
Pral4209g00068 522 ProSiteProfiles PPM-type phosphatase domain profile. 205 512 IPR001932 -
Pral4209g00068 522 Pfam Protein phosphatase 2C 207 505 IPR001932 -
Pral4209g00068 522 MobiDBLite consensus disorder prediction 311 334 - -
Pral4209g00068 522 ProSitePatterns PPM-type phosphatase domain signature. 252 260 IPR000222 GO:0043169
Pral4209g00068 522 SMART PP2C_4 195 510 IPR001932 -
Pral4209g00068 522 PANTHER PROTEIN PHOSPHATASE 167 512 IPR015655 GO:0004722|GO:0006470
Pral4209g00068 522 MobiDBLite consensus disorder prediction 97 112 - -
Pral4209g00068 522 FunFam Protein phosphatase 2C 51 198 520 - -
Pral4209g00068 522 SMART PP2C_SIG_2 239 512 IPR001932 -
Pral4209g00068 522 Gene3D - 195 522 IPR036457 -
Pral4209g00068 522 MobiDBLite consensus disorder prediction 97 131 - -
Pral4209g00068 522 SUPERFAMILY PP2C-like 201 513 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00068 Pral-Chr4209 556952 560813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00068 85 521 PP2C-type Phosphatase Gene Family AT4G26080 48.894 1.17e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00068 K14497 - gmx:100802159 586.26