Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00063 ATGCCCACTAGTCAAGTCCCAGATCGAACCGAGGCCGAATTCTTCTGGAGAATCCTGGGGTTCCTATCGGCCATCATCGGGCTGTTGTCTTTTCTTCTGAGTTCATCTTTTCACTTTATGTTTGGAGAGTTGAACACATGGAAGACTCTTCTCTATGTTCTTTTAAGTATCATGGTCCCCTACAGCATCTTGTTTGTGAAGACATGGAACCCTCCTCATAATTTATTTTTCAGATATCACGTAGCATTTCTGGTCTTGTTTCTCACCTCCCTCTACTCTTATTTCTATGACAAATTCATGAAGATAAAACCGGACATCTTCAGCGTCGTTTCTAGTGGTTCGTTTGCTTTCACGTCTTTAAGCTTGAAAATGCAGAATATTCAAGTTGGATTCGAGGACGATCTTCTCAAATTTTTCCTGGGTTTTCTCACCATCCAACTCATGAAGATCAACTTGCTTCTCGCTTTGATCGGAGCAGCTGTGTGTTACTTTGCCATGGTTCTAATTCCCTGGCGTTTAGATTCTCCACTGGAGACTGTTAGTTGTATTAGTACTCTCCAAGAGAACGTGGCAATAAAAATTGATACTTGTGCTTCCGATCTCAGAAAACAACTGTGTTCCATTCAGCTGGGAATTGTGAATGACAGTGAAAACCCCGAGAGATTCGTTTACCCTTCAGATTTTGAGTCTAGACTCAAGGACGGAATCGCTTCTGGGTTAGTTCAAGAGTGTTACGACGCTTTCATCGCTTGGCGAAAACAGTTCCTAAACGACCAAATGACTACCATTGGGTTTCAGAATCTCAGCATCAATGAAGTCCGCAGGTTGCCGATGAAAACTCTCAAAAACGACATCGAAGAATGGACAAAAGTTTGTTATTTGGTCGTTCAGAGGCTGTTTCCTCAGGAACGGCATGCCTGCAGTGTCGTCTTCTCGGCGCTCTCTCCTCGGGACGAACTGTCTTTCATGGAGGTTTGTCGGGGAATAACGACACAGCTATTGAATTATGCCAAAGCCGTTTCGACCACAACGCTGTCGCCGGAGCGGTTGTTCAGAATTGTCGACGTTTTGGACACATTGGAGGAGATTTTGCCTGACATGGAATCACTGTTCCGTAATAGGATTTGTGAGTTTCTCTACGACGAAGCTATCGCAGTGAGTAAAAGGCTAGGAGAAGCAGCCACAGGAGTCTACAAAGAGCTCGAGAATCTGATTCGTCAAGACCCGGCAAAGGTAAATACACCCGAGTCTCCATGCCTGATTTATATTTACCAATTCTGA 1281 0.4418 MPTSQVPDRTEAEFFWRILGFLSAIIGLLSFLLSSSFHFMFGELNTWKTLLYVLLSIMVPYSILFVKTWNPPHNLFFRYHVAFLVLFLTSLYSYFYDKFMKIKPDIFSVVSSGSFAFTSLSLKMQNIQVGFEDDLLKFFLGFLTIQLMKINLLLALIGAAVCYFAMVLIPWRLDSPLETVSCISTLQENVAIKIDTCASDLRKQLCSIQLGIVNDSENPERFVYPSDFESRLKDGIASGLVQECYDAFIAWRKQFLNDQMTTIGFQNLSINEVRRLPMKTLKNDIEEWTKVCYLVVQRLFPQERHACSVVFSALSPRDELSFMEVCRGITTQLLNYAKAVSTTTLSPERLFRIVDVLDTLEEILPDMESLFRNRICEFLYDEAIAVSKRLGEAATGVYKELENLIRQDPAKVNTPESPCLIYIYQF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00063 426 Pfam Exo70 exocyst complex subunit 287 415 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pral4209g00063 426 Gene3D Exocyst complex component Exo70 176 417 - -
Pral4209g00063 426 PANTHER EXOCYST COMPLEX PROTEIN EXO70 235 415 IPR004140 GO:0000145|GO:0006887
Pral4209g00063 426 SUPERFAMILY Cullin repeat-like 237 415 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00063 Pral-Chr4209 522680 523960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00063 226 426 EXO70 exocyst subunit family AT5G58430 40.686 4.91e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00063 - K07195 pcin:129304004 506.908