Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00062 ATGCCTACTAATCTAATCCCAGATGCAACCGAGGTCGACTTCTTCTGGAGAATCCTGGGGTTCCTATCGGCCACCATCGGGCTGTTATCTTATCTTTTGAGTTCATCTTTTCACTTTATATTTGGAGAGCTCAACACTTGGAAGACTCTTCTGTATGCTCTTTTGATTATTATCGTCCCCTACAGTATCTTGCTTGTGAAGACATGGAACCCTCCTCAGAATTTATTGTTCAGATCTCACCTGGCATTTCTGGTCTTGCTCCTCTCCTCAATTTACTCTTATTTCTATGACAAATTCATGAAGATAAAACCGGACGTGTTCAGTCTCGTTTCCACTGGTTCATTTGCTTTCACGTCTTTAAGCTTGAGAATGCAGAATATTCAATTTGGATTCGAGGACGATCTTCTCAAATTTTTCCTGGGTTTTCTCACCATCCAACTCATGAAGATCAACTTGCTTCTCACTTTGATCGGAGCAGTTTTATGTTACTTTGCCATCGTTCTAATTCCCTGGTGTTTAGATTCTCCACTGGAGACTGTTAGGTGTATTAGTACCCTTCAAGAGAACGTGGCAATAAACAGTGATACTTGTGCTTCCGATCTCGGAAAACAACTGGGTTCCATTCAGCTGGGAATTGTGAATGATAGTGAAAATCCTGAGAGATTCGTTTACCCTTCAGATTTTGAGTCTAAGCTCAAGGACGCAATCGCTTCGGGGTTAGTTAAAGAGTGTTACGACGCTTTCATCACTTGGCGAAAACAGCTCCTAAACGACAAGATGACTACTATGGGGTTTCAGAATCTCAGCATCAATGAAGTCCCCAGGTTGCCCATGAAAACTCTAAAAAACGACATCGAAGAATGGACAAAAGCTTGTCACTTCGTCATTAAGACGTTGTTTCCTCAGGAACGGCATGCTTGCAGTGTCGTCTTCGCGGCGCTCTCTCCTCTGGACGAACTGTCTTTCATGGAGGTTTGTCGGGGAATAACGACCCAGCTATTGAATTATGGCAACGCCGTTTCGACCAGAACGCTGTCGCCGGAGCATTTGTTCAGAATCGTTGTCGTTTTGGACACACTGGAGGAGATTTTGCCTGACATGGAATCACTTTTCTGCAATAAGATTTGTGAGTTTCTCTACGATGAAGCTATCGCAGTGAGCAGAAGACTAGGAGAAGCAATCACAGGAGTCTTCATGGAGCTCGAGAATGGTCAACACCCGGCAAAGGTAAATACCCACGAATCTCAATGCCTGATCTGCATTTACCAATTCTGA 1275 0.4369 MPTNLIPDATEVDFFWRILGFLSATIGLLSYLLSSSFHFIFGELNTWKTLLYALLIIIVPYSILLVKTWNPPQNLLFRSHLAFLVLLLSSIYSYFYDKFMKIKPDVFSLVSTGSFAFTSLSLRMQNIQFGFEDDLLKFFLGFLTIQLMKINLLLTLIGAVLCYFAIVLIPWCLDSPLETVRCISTLQENVAINSDTCASDLGKQLGSIQLGIVNDSENPERFVYPSDFESKLKDAIASGLVKECYDAFITWRKQLLNDKMTTMGFQNLSINEVPRLPMKTLKNDIEEWTKACHFVIKTLFPQERHACSVVFAALSPLDELSFMEVCRGITTQLLNYGNAVSTRTLSPEHLFRIVVVLDTLEEILPDMESLFCNKICEFLYDEAIAVSRRLGEAITGVFMELENGQHPAKVNTHESQCLICIYQF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00062 424 Pfam Exo70 exocyst complex subunit 287 403 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pral4209g00062 424 PANTHER EXOCYST COMPLEX PROTEIN EXO70 224 404 IPR004140 GO:0000145|GO:0006887
Pral4209g00062 424 Gene3D Exocyst complex component Exo70 180 412 - -
Pral4209g00062 424 SUPERFAMILY Cullin repeat-like 222 403 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00062 Pral-Chr4209 485850 487124 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00062 226 410 EXO70 exocyst subunit family AT5G58430 40.642 2.13e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00062 - - pcin:129304004 510.76