Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00060 ATGTCCATTAACCTAATCCCAGATAAAGATGAGGTCGAATTCTTCTGGTGGAGAAACCTGGGATTCCTATCGAGTATCATTGGCCTGTTATCTTCTCTTCTGAGTTCCTCTTTTCACTTTATATTTGGTGAGTTGAACACTTGGAAGACTCTTCTGTATATTTTTTTGAGTCTGATCCTTCCCTACGGTATCTTCTTCGTGAAGACATGGAAACCTCTTCAGAATTTATTGTTCAGATCTCACCTAGCATTTCTGGCCTTGCTCCTCTCCTCAATTTACTCTTATTTCTATGACAAATTCGTGAAGGAAAAGCCGGACATGTTCAGTCTCCTTTCTACTGTTTCATTTGCTTTGACGTCTTTAAGCTTGAAAAGGCAGAATATTCAACTGGGATTTGAGGATGATCTTCTCAAATTTTTCCTGGGTTTTCTCACCATTCAACTCATGACGATCAACTTGCTTCTCGCTTTGGTGGGAGCAGCTTTGTGTTACTTCGCCATCGTTCTAATTCCTTGGAGTTTAGATTCTCCATTGGAGACTGTTAGTTGTATTACTGCCCTCCAAGAGAACGTGGCAATAAAAATTGATACTCGTGCTTCCGATCTCCGAAAACAATTGTGTTCCACTCAGCTCGGAATTGTGAAGGACAGTGAAAATCCTGAGAGACTCGTTTACCCTTCAGATTTTGAGTCCAAACTCAAGGACGCAATCGCTTCTGGGTTAGTTGAAGAGTGTTACGACGCTTTCATCACTTGGCGAAAGCAGTTCCTAAACGACCAGATGACTACTATGGGGTTTCAGAATCTCAGCATCAATGAAGTCCCCAGGTTGCCGATGAAAACTCTCAAAAACGACATCCAAGAATGGACAAAAGCTTGTCATTTGGTCGTTAAGAGGCTGTTTCCCGAGGAACGGCATGCCTGCAGTGTCGTCTTCTCGGCGCTCTCTCCTCGGGACGAACTGTCCTTCATGGAGGTCTGTCGGGGAATAACGACACAGCTATTAAATTATGCCAAAGCCGTTTCGACTACAACGCTGTCGCCGGAGCGTTTGTTCAGAATTGTCGACGTTTTGGACACATTGGAGGAGATTTTGCCTGACATAGAATCACTGTTCCGCAATAAGATTTGTGAGTTTCTCTACGATGAAGCTATCGCAGTGAGTAAAAGGCTAGGAGAAGCAATCACAGGAGTCTTCAAAGAGCTCGAGAATCTGATTCTTCAAGACCCGGCAAAGGTAAATACACCCGAGTCTCCACGCCTGATTTATATTTACCAATTCTGA 1284 0.4346 MSINLIPDKDEVEFFWWRNLGFLSSIIGLLSSLLSSSFHFIFGELNTWKTLLYIFLSLILPYGIFFVKTWKPLQNLLFRSHLAFLALLLSSIYSYFYDKFVKEKPDMFSLLSTVSFALTSLSLKRQNIQLGFEDDLLKFFLGFLTIQLMTINLLLALVGAALCYFAIVLIPWSLDSPLETVSCITALQENVAIKIDTRASDLRKQLCSTQLGIVKDSENPERLVYPSDFESKLKDAIASGLVEECYDAFITWRKQFLNDQMTTMGFQNLSINEVPRLPMKTLKNDIQEWTKACHLVVKRLFPEERHACSVVFSALSPRDELSFMEVCRGITTQLLNYAKAVSTTTLSPERLFRIVDVLDTLEEILPDIESLFRNKICEFLYDEAIAVSKRLGEAITGVFKELENLILQDPAKVNTPESPRLIYIYQF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00060 427 Gene3D Exocyst complex component Exo70 178 418 - -
Pral4209g00060 427 PANTHER EXOCYST COMPLEX PROTEIN EXO70 226 416 IPR004140 GO:0000145|GO:0006887
Pral4209g00060 427 SUPERFAMILY Cullin repeat-like 224 416 IPR016159 -
Pral4209g00060 427 Pfam Exo70 exocyst complex subunit 288 416 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00060 Pral-Chr4209 417584 418867 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00060 227 416 EXO70 exocyst subunit family AT5G58430 43.684 1.76e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00060 K07195 - pcin:129304004 472.241