Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00056 ATGTCCATTAACCTAATCCCAGATAAAGATGAGGTCGAATTCTTCTGGTGGAGAAACCTGGGATTCCTATCGGGTATCATTGGCCTGTTATCTTATCTTCTGAGTTCCTCTTTTCACTTTATATTTGGTGAGTTGAACACTTGGAAGACTCTTCTGTATATTTTTTTGAGTCTGATCCTTCCCTACGGTATCGTCTTCGTGAAGACATGGAAACCTTTTCAGAATTTATTGTTCAGATCTCACCTAGCATTTCTGCTCTTGCTCCTCTCCTCAATTTACTCTTATTTCTATGACAAATTCGTGAAGGAAAAGCCGGACATGTTCAGTCTCCTTTCTACTGGTTCATTTGCTTTGACGTCTTTAAGCTTGAAAAGGCAGAATATTCAACTGGGATTTGAGGATGATCTTCTCAAATTTTTCCTGGGTTTTCTCACCGTCCAACTCATGAAGATCAACTTGCTTCTCGCTTTGGTGGGAGCAGCTTTGTGTTACTTCGCCATCGTTCTAATTCCTTGGAGTTTAAATTCTCCATTGGAGACTGTTAGTTGTATTACTGCCCTCCAAGAGAACGTGGCAATAAAAATTGATACTCGTGCTTCCGATCTCCGAAAACAATTGTGTTCCACTCAGCTGGGAATTGTGAATGACAGTGAAAATCCCGAGAGATTCGTTTACCCTTCAGATTTTGAGTCTAGACTCAATGACGCAATCGCTTCTGGGTTAGTTGAAGAGTGTTACGACGCTTTCATCACTTGGCGAAAACAGCTCCTAAACGACCAGACGACTACTATGGGGTTTCAGAATCTCACCATCAATGAAGTCCCCCGGTTGCCGATGAAAACTCTCAAAAACGACATCGAAGAATGGACAAAAGCTTGTCATTTGGTCGTTAAGACGCTGTTTCCTCAGGAACGGCGTGCCTGCAGTGTCGTCTTCTCGGCGCTCTCTCCTCGGGACGAACTGTCTTTCATGGAGGTTTGTCGGGGAATAACGACACAGCTATTGAATTATGCCAAAGCCGTTTCGACTACAACGCTGTCGCCGGAGCGTTTGTTCAGAATTGTCGACGTTTTGGACACATTGGAGGAGATTTTGCCTGAAATGGAATCACTGTTCCGTAATAAGATTTGTGAGTTTCTCTACAATGAAGCTATCGCAGTGAGTAAAAGGCTAGGAGAGGCAATCACAGGAGTCTTCAAAGAGCTCGAGAATCTGATTCGTCAAGACCCGGCAAAGGTAAATACACCGAGTCTCCATGCCTGA 1263 0.4363 MSINLIPDKDEVEFFWWRNLGFLSGIIGLLSYLLSSSFHFIFGELNTWKTLLYIFLSLILPYGIVFVKTWKPFQNLLFRSHLAFLLLLLSSIYSYFYDKFVKEKPDMFSLLSTGSFALTSLSLKRQNIQLGFEDDLLKFFLGFLTVQLMKINLLLALVGAALCYFAIVLIPWSLNSPLETVSCITALQENVAIKIDTRASDLRKQLCSTQLGIVNDSENPERFVYPSDFESRLNDAIASGLVEECYDAFITWRKQLLNDQTTTMGFQNLTINEVPRLPMKTLKNDIEEWTKACHLVVKTLFPQERRACSVVFSALSPRDELSFMEVCRGITTQLLNYAKAVSTTTLSPERLFRIVDVLDTLEEILPEMESLFRNKICEFLYNEAIAVSKRLGEAITGVFKELENLIRQDPAKVNTPSLHA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00056 420 Gene3D Exocyst complex component Exo70 175 418 - -
Pral4209g00056 420 PANTHER EXOCYST COMPLEX PROTEIN EXO70 227 416 IPR004140 GO:0000145|GO:0006887
Pral4209g00056 420 SUPERFAMILY Cullin repeat-like 227 416 IPR016159 -
Pral4209g00056 420 Pfam Exo70 exocyst complex subunit 288 415 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00056 Pral-Chr4209 378065 379327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00056 237 417 EXO70 exocyst subunit family AT5G58430 45.304 1.43e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00056 - K07195 pcin:129304004 485.723