Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00038 ATGAGTTCCTCATTAGAGAGCCGCACTGCAGAACCCAGAGATGCTTTGGGAGATAATACTTCTGTAAAAAGTTCCATAATAAAGAGCTCTCGTGCAAATGCATCATGCAGTGTCCATTTTTCTTCGCAATCTGCTGAAGCGCAGAGGAGACTTTCGTATTACTCGAAGATTCAAAATGTTTTGAGTAACCCCGCCATGGCAGAATTCCGCGATGTGTTTCAACTGAAACGTGGAAGCTATGCAGATCTCCCTCCTGAAAAAATCTCAGAGATGATGAAATCAAAGGCTCTAGATAATGCTCCTACTCAGTCGCTTTTAAGTGTTGTGAATGGTATTCTAGAAGAAGGTGTTGAGAGAAGAAATGGTGAAATACCTCCTCGTGTGGCTTGCTTGCTGAGAAAAGTGGTGCAAGAGATTGAACGTCGCATTGCAACACAGGCAGACCATTTACGAACTCAAAACAATCTTTTTAAGGCTCGTGAAGAAAAATTCCAGTCGAGAATTAAAGTACTTGAAGCTCTTGCATCTGAAACTACGAAAGAGAGTGAGGTGTCTACGGACCAGGTTCAGCAGTTGAAGATTGAGAAGACCAGAGTGGAACATAACAAGGCTGATGAGGAAAATATTAATAGGTTGATGAAAGAGCAGGATCAGAAAAATATGGAAATTTCAAGGTTGAAGCAAGAAATGGGAACAATGAAAACGAGATATGAGGAAGATTTTTCAAGGTTGAAGCAAAAAATGGAAACAATGGAAACTAGATATGAAGAAGATAGGATGAAGGTCAATGAGGAAGATGTCAACAGGTTGATGAAAGAGCAAGATCAGAAAAATATGGAAATTTCAAGGGTGAAGCAAGAAATGGAAACAATGAAATCCAGATATGAGGGTGATGTTAGTAAGTTGAAGAAAGAGCAGGACCAGAAGAACAAGGAAATTTCAAGGTTGAAGCAAGAAATAGAAACAATGAAAAGCAAGTACGAGGAAGATAGGAAAAAGGCTAATGGCGAAGTTGCTAATAGGTTGATGGAAGAGGAAGATCAGAAAAATGTGGAAATTTCAAGGGCTAAGCAAGAAATAGAAACAATGAAATCCACATATGAGGGTGATGTTAGTAAGTTGATGAAAGAGCAGGACCAGAAAAACATGGAGATTTCAAGTTTGAAGCAAGAAATGGAAACAATGAAAAGCACATATGAATTACGCTGCTCACAGTTGGAAAAAGAAGCCAAAGGTGCTAAAGGAGAAATAGAACACAAGTCACAAGAATATGAACATTTGTTGAAAGATCTAAGAACTAAGGTGAAGCAGGTTGAGGCCTGTTTTGAGTCAGAATGTCAGAAGTGGAACGTGAAACAGAACAACCTGCATAATTCTTTGGATTTCCAATTCAGCATAGTACAGCAATTGAAGTTGTCTTGGAAATCTGTCAAACAAGATGTCATGCAAGAGAAGAGGGTCTACTCTGACGAATGTAATAGGTTAGGTCTAAGTCTTCAGCCACTTGTAAAGGCAGCTGAGAACCATCATGCTGTTCTTGCTGAAAATCGAAAACTGTTTAATGAAATTCAAGAATTAAAAGGAAACATCAGAGTTTATTGCCGAGTCAGACCATTTCTTCCTGGACAAAAGGAAAAAAAGTCTATTGTAGAACATGCTGGTGAAAATGATTTGGTTGTGGCTAATCCAGCCAAACAAGGGAAAGATGCCCTTCGATCATTTAAATTCAATAGGGTTTTCGGTCCAACCACAACTCAAGTGGAAGTCTACTCTGACATCCAACCCTTTGTACGATCAGTACTTGATGGATACAATGTATGCATATTTGCTTATGGACAAACTGGTTCAGGGAAAACTTACACAATGAGTGGCCCAAATGGAGCAACAAATGAGACTTATGGTGTTAATTATCGAGCTCTAAATGACCTCTTTAGCATTTCTGAGAGCAGAAGGAGTTCTATAGTCTATGAGATTGGGGTTCAAATTGTTGAGATATATAATGAACAAGTGCGAGATTTGTTATCATCTAACGGCACTCAGAAGAAACTTGGGATATCGAATCACTCTCAGCACAAGGGTTTAGCCGTACCAGATGCCAACATGGTCCCTGTGAAATCAACTTCAGATGTGATGGACCTAATGGACCTTGGGCTAAAAAATAGGGCCAGCAGTGCCACCGCTATGAATGAAAGAAGCAGCCGCTCTCACAGTGTGGTCTCCATTCATGTTCGGGGGACGGATGTAAAGTCTGGTTCTAGTCTATTTGGCAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTCGATCGCTCCGAAGTAACTGGGGATAGGCTCAAGGAAGCACAACATATAAACAAATCACTGTCTGCCCTTGGAGATGTCATATCTGCCCTTTCTCAGAAGAGCGCCCATATACCATACAGAAACAGCAAGCTTACTCAACTCCTGCAAAGTTCTCTTGGTGGCCAAGCAAAAACACTTATGTTTGTCCAAGTCAATCCAGATGTAAATTCAGCTTCAGAAACTCTAAGCACATTAAAATTTGCTGAGAGGGTTTCCGGAGTTGAGTTAGGAGCTGCACGAAGTACCAAAGAGGGCAGAGATGTTAGAGAATTAATGGAGCAGGTGGCTTCTCTCAAGGACACCATTTCTGAAAAAGATGAAGAAATTGAGAAGCTACAATTACTCAAAGATCTGAAGAATAGCGGAACAGGCTCCTCTTGA 2727 0.4045 MSSSLESRTAEPRDALGDNTSVKSSIIKSSRANASCSVHFSSQSAEAQRRLSYYSKIQNVLSNPAMAEFRDVFQLKRGSYADLPPEKISEMMKSKALDNAPTQSLLSVVNGILEEGVERRNGEIPPRVACLLRKVVQEIERRIATQADHLRTQNNLFKAREEKFQSRIKVLEALASETTKESEVSTDQVQQLKIEKTRVEHNKADEENINRLMKEQDQKNMEISRLKQEMGTMKTRYEEDFSRLKQKMETMETRYEEDRMKVNEEDVNRLMKEQDQKNMEISRVKQEMETMKSRYEGDVSKLKKEQDQKNKEISRLKQEIETMKSKYEEDRKKANGEVANRLMEEEDQKNVEISRAKQEIETMKSTYEGDVSKLMKEQDQKNMEISSLKQEMETMKSTYELRCSQLEKEAKGAKGEIEHKSQEYEHLLKDLRTKVKQVEACFESECQKWNVKQNNLHNSLDFQFSIVQQLKLSWKSVKQDVMQEKRVYSDECNRLGLSLQPLVKAAENHHAVLAENRKLFNEIQELKGNIRVYCRVRPFLPGQKEKKSIVEHAGENDLVVANPAKQGKDALRSFKFNRVFGPTTTQVEVYSDIQPFVRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATNETYGVNYRALNDLFSISESRRSSIVYEIGVQIVEIYNEQVRDLLSSNGTQKKLGISNHSQHKGLAVPDANMVPVKSTSDVMDLMDLGLKNRASSATAMNERSSRSHSVVSIHVRGTDVKSGSSLFGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVISALSQKSAHIPYRNSKLTQLLQSSLGGQAKTLMFVQVNPDVNSASETLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVASLKDTISEKDEEIEKLQLLKDLKNSGTGSS 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00038 908 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 471 858 - -
Pral4209g00038 908 Coils Coil 371 423 - -
Pral4209g00038 908 MobiDBLite consensus disorder prediction 1 22 - -
Pral4209g00038 908 Coils Coil 267 337 - -
Pral4209g00038 908 PRINTS Kinesin heavy chain signature 603 624 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4209g00038 908 PRINTS Kinesin heavy chain signature 726 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4209g00038 908 PRINTS Kinesin heavy chain signature 757 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4209g00038 908 PRINTS Kinesin heavy chain signature 806 827 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4209g00038 908 ProSiteProfiles Kinesin motor domain profile. 529 856 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4209g00038 908 Coils Coil 234 261 - -
Pral4209g00038 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 529 894 IPR027417 -
Pral4209g00038 908 Coils Coil 339 359 - -
Pral4209g00038 908 Gene3D Kinesin motor domain 471 858 IPR036961 -
Pral4209g00038 908 Gene3D - 337 370 - -
Pral4209g00038 908 Gene3D - 263 297 - -
Pral4209g00038 908 Gene3D - 371 407 - -
Pral4209g00038 908 Gene3D - 205 242 - -
Pral4209g00038 908 Gene3D - 298 332 - -
Pral4209g00038 908 PANTHER KINESIN-LIKE PROTEIN KLP-3 415 893 IPR027640 GO:0003777|GO:0007018
Pral4209g00038 908 SMART kinesin_4 527 864 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4209g00038 908 Coils Coil 870 897 - -
Pral4209g00038 908 Coils Coil 189 229 - -
Pral4209g00038 908 Pfam Kinesin motor domain 535 854 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00038 Pral-Chr4209 254951 261334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00038 239 890 Calmodulin-binding Proteins AT5G65930 30.977 4.26e-71 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00038 K10406 - gmx:100779403 1028.47