Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00035 ATGAGTATTATTCTCTGCCTTCTGTCCCTTTGTTCCTACCCTTTAGCTATTCCATTCATTAAAGCATATGAAATAAATGTAGAATCGCATGAACTTGATAGGGTAACTAATCTTCCTGGCCAACCTACAACTCCATCAGTCTCACAATTTTCAGGTTACATCACTGTCAATAAGGATCATGGGAGAGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCATCCAAGAAGCCTCTTCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGGTATGGTGCTGTTGTTGAAATAGGACCTCTTACAGTCAACAAAAATGGTGAAGGACTGGAATTCAACCCCTATTCCTGGAATAAAGAGGCAAATTTGTTATTTGTGGAGTCACCAGTCGGAGTTGGTTTTTCTTACACCAACACATCTTCTGATCTCAGCATATTAGAGGACAGCTTTGTGGCTGAAGATGCCTACAATTTCTTGGTAAATTGGCTGCAAAAGTTCCCGGAGTTTAAATCTCAAGATTTCTTTATATCAGGAGAGAGTTACGCTGGCCACTATATCCCTCAGCTGGCAGAGCTCATCTTTGATCGAAACAAAGATAAAAACAAATACTCATTTATCAATCTTAAAGGCTTTATTGTGGGGAATCCGGAAACCGAAAATTATTATGATTATAAGGGCCTTCTGGAATATGCATGGAGCCATGCAGTCATATCAGATCAGGAATATGACAAAGCAAAAAATGTTTGTGATTTCAAGCAATTTTATTGGTCTGAGGAATGCAATGAGGCCATGAATGTGGTCTTCCGAGATTACAAGGAGATAGATATTTACAACATTTATGCCCCCGCATGTCGCCTAAATAATACTCCCTCCATGGCTCATGACAGTAATAATAGAGGCTCCGAATCAGTTCCTGAGGGTGTAAGTGATTTCAGACTGAGAAGGATGAGGCTTTTTGGAGGCTATGACCCATGTTATTCAACTTATGCAGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGCTAATTTTAAAGGAGGAAACACTAGTGTTGCATGGAAGACTTGCAATGGGGACGCGGATGGCAGGATTCCAGTGATAGGGACAAGATATTGCATTGAAGCCCTTGGATTGCCGCTCAAGTCTAGCTGGCGAACTTGGTACCATGATAATCAGGTGGGAGGAAGGGTAGTGGAGTATGAAGGGCTAACATATGTGACAGTAAGAGGAGCAGGACACTTGGTGCCACTCAACAAGCGTAGTGAGGCTCTCTCCCTCATTCATTCTTTCCTCACAGGACAGAGTCTCCCTGCTCATCCCTGA 1341 0.4206 MSIILCLLSLCSYPLAIPFIKAYEINVESHELDRVTNLPGQPTTPSVSQFSGYITVNKDHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNKNGEGLEFNPYSWNKEANLLFVESPVGVGFSYTNTSSDLSILEDSFVAEDAYNFLVNWLQKFPEFKSQDFFISGESYAGHYIPQLAELIFDRNKDKNKYSFINLKGFIVGNPETENYYDYKGLLEYAWSHAVISDQEYDKAKNVCDFKQFYWSEECNEAMNVVFRDYKEIDIYNIYAPACRLNNTPSMAHDSNNRGSESVPEGVSDFRLRRMRLFGGYDPCYSTYAEEYFNRIDVQSSFHANFKGGNTSVAWKTCNGDADGRIPVIGTRYCIEALGLPLKSSWRTWYHDNQVGGRVVEYEGLTYVTVRGAGHLVPLNKRSEALSLIHSFLTGQSLPAHP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00035 446 Gene3D - 353 439 - -
Pral4209g00035 446 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 425 IPR001563 GO:0004185|GO:0006508
Pral4209g00035 446 SUPERFAMILY alpha/beta-Hydrolases 35 442 IPR029058 -
Pral4209g00035 446 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Pral4209g00035 446 Pfam Serine carboxypeptidase 39 363 IPR001563 GO:0004185|GO:0006508
Pral4209g00035 446 Gene3D alpha/beta hydrolase 29 289 IPR029058 -
Pral4209g00035 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 409 422 IPR001563 GO:0004185|GO:0006508
Pral4209g00035 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Pral4209g00035 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Pral4209g00035 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Pral4209g00035 446 FunFam Carboxypeptidase 29 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00035 Pral-Chr4209 228501 232218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00035 363 442 Calmodulin-binding Proteins AT2G22960 32.099 2.16e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00035 K16297 - gmx:100815141 737.258