Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00034 ATGGCAAAACCCAACTTCTCTCCTCTTCTCTCTCAACTTTTAGCCATAGTTGTTACCACTCTGTATCTGTGCCTTCAGGGGAATACTGGGTTTGCTTTATCTTCTTCCTCAGACCCGTTTGTCCAGCAAGAAGAAGACCGGGTCGAGTGGCTTCCGGGTCAAGAGTTTAACGTCAATTTTGCACATTACGCTGGGTATGTCAAAGTGAACCAGGAAGCTGGGAGGGCACTGTTTTACTGGTTCTTTGAAGCTGCCTCAGAACCTGAAACTAAGCCCCTCCTTCTATGGCTCAATGGAGGACCTGGATGTTCATCCATTGGATTGGGGGCAGCAAATGAAATTGGTCCCTTTCGCATTAAGCCGGGTGGCAAGACACTTTATCTAAATCCTTACTCTTGGAATCGAGTTGCCAACCTTCTTTTTGTTGATTCTCCTGTTGGAGTTGGATTTTCATATTCAAAGACTCTGTCGGACATAAAGAACAATGGCGATAGTAGGACTGCTATGGATTCTTTGGAATTCCTATTGAAGTGGTTGGAGCGATTTCCTCAGTATAAAGGAAGAGATTTCTTTATATCTGGTGAGAGTTATGCAGGGCATTATGTCCCTCAACTTAGCCAACTTATTCTGAAGCACAACAAGAGAGCCAAAGATAAATGCATCAATCTGAAAGGCTACTTGGTAGGAAATCCTCTAACTGATGATTACAATGATCATAAGGGAGTTGCCCAGTTTTTATGGACCTCTGGTTTGATTTCAGATCAAACACACGAGATATTGAACATTAAATGCAATCTTGAGCCTTTCGTGCATCCTTCAGATTCATGTCAGAAAGTTTTAGACATTGTTGATAAAGAAATTGGCAACCTTGATCAGTACAGTATTTTTACTCCTCCATGCCCTTCTAATGTAAGCCAAACAAACCTGCTGGCAAAAAGAACTCATAGAATTGGCAGGCTCAGAGCGCCATTCGATCCTTGCGCATCGAAGCACACCACTGTGTACTTTAATTTACCTGAGGTTCAAAAGGCTCTTCATCTTGATCCAGCTCATAAACCTCACAAATGGAAAACCTGCAGTGACGTAGTAAGTAAAACCTGGAAAGATTCTCCAGTGACAGTGCTTGATATTTATCAAGAACTTGTTCAGGCAGGACTGAGGATTTGGGTTTTCAGTGGTGATACAGATTCTGTGCTTCCAGTGACATCCACTCGCTACAGTCTAAATGCTCTGAAGCTTCCAAGTGTAAGCCCTTGGCGTCCTTGGTATGACAATGGGCAGGTGGGAGGATGGACAGAGGAATATGAAGGGGTGACTTTTGTGGTAGTAAGAGGGGCAGGGCATGAGATTGCCAAGCACAAACCAAAATATGCTTTCACTCTCATCAGAGCCTTCATTTCTGGAACTTCCATGCCTTCTTCTCATGACTTTGAGCTTCTCAGTGCCTCTTGA 1452 0.4353 MAKPNFSPLLSQLLAIVVTTLYLCLQGNTGFALSSSSDPFVQQEEDRVEWLPGQEFNVNFAHYAGYVKVNQEAGRALFYWFFEAASEPETKPLLLWLNGGPGCSSIGLGAANEIGPFRIKPGGKTLYLNPYSWNRVANLLFVDSPVGVGFSYSKTLSDIKNNGDSRTAMDSLEFLLKWLERFPQYKGRDFFISGESYAGHYVPQLSQLILKHNKRAKDKCINLKGYLVGNPLTDDYNDHKGVAQFLWTSGLISDQTHEILNIKCNLEPFVHPSDSCQKVLDIVDKEIGNLDQYSIFTPPCPSNVSQTNLLAKRTHRIGRLRAPFDPCASKHTTVYFNLPEVQKALHLDPAHKPHKWKTCSDVVSKTWKDSPVTVLDIYQELVQAGLRIWVFSGDTDSVLPVTSTRYSLNALKLPSVSPWRPWYDNGQVGGWTEEYEGVTFVVVRGAGHEIAKHKPKYAFTLIRAFISGTSMPSSHDFELLSAS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00034 483 Gene3D alpha/beta hydrolase 42 302 IPR029058 -
Pral4209g00034 483 Gene3D - 374 468 - -
Pral4209g00034 483 FunFam Carboxypeptidase 374 468 - -
Pral4209g00034 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 203 IPR001563 GO:0004185|GO:0006508
Pral4209g00034 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Pral4209g00034 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 141 IPR001563 GO:0004185|GO:0006508
Pral4209g00034 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Pral4209g00034 483 SUPERFAMILY alpha/beta-Hydrolases 43 471 IPR029058 -
Pral4209g00034 483 ProSitePatterns Serine carboxypeptidases, serine active site. 192 199 IPR018202 GO:0004185
Pral4209g00034 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 47 455 IPR001563 GO:0004185|GO:0006508
Pral4209g00034 483 Pfam Serine carboxypeptidase 52 468 IPR001563 GO:0004185|GO:0006508
Pral4209g00034 483 Gene3D - 327 364 - -
Pral4209g00034 483 FunFam Carboxypeptidase 42 302 - -
Pral4209g00034 483 FunFam Carboxypeptidase 325 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00034 Pral-Chr4209 222224 225822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00034 337 468 Calmodulin-binding Proteins AT2G22960 28.571 7.25e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00034 K16297 - mnt:21391855 679.093