Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4209g00015 ATGGACATGCTGGGTGTCCAAGATTACGGTACTCCCTCTTTGTTCGATTGGCTTCCGGCCGCCACTACCACGGCATCGTCCGTCGCAGCTGATGTAGCCCACCAGTCCTCCTTCCCGTCACCGGCGAGCTCAGGTGGGGTGCTGAACACTCCGGCCTCCCCGAATTCCTCCTCGCTTTCGTCCTCGTCCAACGACGGCGCCGCCCCCGCCAGCGGCCACGGCAGTATGGAGGAAGAACAGCAGAGTTGCAAAGCAGAGGATGAAGATGTGGACGACGGAGGAAGAGGAGGCGACCAAGGACAAGACAAATCTAAGGAACTGGTGAAACCAAAAAAGAAGAAGCAAAAGAAGGAAAGAGAGCCAAGATTTGCGTTCATGACGAAAAGCGAAGTTGATCACCTCGACGATGGCTATAGGTGGCGTAAGTACGGCCAGAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGCTATTATCGATGCACGACGGTTGGTTGCGGCGTGAAGAAGAGGGTGGAGCGGTCGTCGGAGGACCCTACCATCGTAGTGACGACGTACGAGGGGCAGCACAAGCACCCAAGTCCGGCGGCGGCGGCGACTCGGTCCGGCCTTGTAGGGTACGGTGGTGGTTTTGGTTTTCCACAGCATTATGATCATCGTCAGTTCCAGCAGCAGAGCATGAATAACGTGTCGTCCTCTTCTTCATCGCCATTGTTGTACAACTCAAGTTCATCCATATTGAACAGTATTGGATCTGGCAGCTACATGAATATGAACCCATCGACGAGGACAACGTCGTTTCTGAGCTCGTACCATAACGGTAACAGATCAGCAGGTTTTGGAGGACTAGGGTCTAGAATGGATGAAGGTAGTTTGTTAAGAGACAATGGACTTCTTCAGGACATTTTCGTACCATCGCAGGTGATGATGAACAAGGATGAAAAGCAGTGA 948 0.5306 MDMLGVQDYGTPSLFDWLPAATTTASSVAADVAHQSSFPSPASSGGVLNTPASPNSSSLSSSSNDGAAPASGHGSMEEEQQSCKAEDEDVDDGGRGGDQGQDKSKELVKPKKKKQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCGVKKRVERSSEDPTIVVTTYEGQHKHPSPAAAATRSGLVGYGGGFGFPQHYDHRQFQQQSMNNVSSSSSSPLLYNSSSSILNSIGSGSYMNMNPSTRTTSFLSSYHNGNRSAGFGGLGSRMDEGSLLRDNGLLQDIFVPSQVMMNKDEKQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4209g00015 315 MobiDBLite consensus disorder prediction 87 108 - -
Pral4209g00015 315 FunFam WRKY transcription factor 57 120 194 - -
Pral4209g00015 315 MobiDBLite consensus disorder prediction 24 69 - -
Pral4209g00015 315 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4209g00015 315 SMART WRKY_cls 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4209g00015 315 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 34 232 IPR044810 GO:0003700
Pral4209g00015 315 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4209g00015 315 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4209g00015 315 MobiDBLite consensus disorder prediction 24 123 - -
Pral4209g00015 315 SUPERFAMILY WRKY DNA-binding domain 126 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4209g00015 Pral-Chr4209 123204 125085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4209g00015 119 307 WRKY Transcription Factor Family AT5G49520 46.154 5.17e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4209g00015 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4209g00015 - - pcin:129319667 306.605