Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4208g00003 ATGCCTTCCTCTTCTTCTCCTCCTCCTTCATTGTTCATAATAAAGCCAGTTCTGTGTTCTATTGTGTTGTTCTTAGCAACATGCCCTAGTTATGTTCTTGGTACCATCGAGCTACAAGATTTAGTCATCGATTCTCCTTTATTAACCAAAAACATTCCTGCGAATCGAACCATTAAGGTCGATGATGAAGGCGATGGAGAATTCAGATCCATTCAAGCTGCCATAGATTCTATTCCTGAAGGAAATTCTCAGTGGGTCATCGTCCACGTCAGGAAAGGAGTATACAGAGAGAAGGTAACGATACCAAAGAACAAGCCGTACATATTCTTGAGAGGAAATGGGAGAGGCAAAACTGCTATAGTTTGGTCTCAGAGTTCTGTTGATAATATAGAATCTGCAACTTTCAAAGTCGAAGCTCATAACGTCATTGTCTTTGGAGTCAGCATCAAGAACGAGGCGCCTACTGGGGTTGCTTACACGTCGCAGAACCAATCAGTGGCAGCATTTGTAGGAGCTGATAAAGTAGGGTTCTATCATTGTGCGTTCTATAGCACTCACAACACTTTGTTTGATTACAAAGGCAGACATTACTATGATGAATGCTACATCCAAGGCTCTATTGATTTCATCTTTGGCCGCGGCAGATCCCTCTTCCATAAATGTGAGATATTTGTGATAGATGACAAGAGGACGGTGATAAAGGGGTCGATCACAGCACAGAACAGAGAGTCAGAATCAGAGGAAAGTGGGTTTGTGTTTGTGAAAGGAAAGGTATATGGCATAGGAGGGGTGTACCTGGGAAGAGCCAAGGGTCCTCATTCAAGGGTCATTTTTGCTAAAGCCTATCTCTCTGCCACTATTGCTCCTGAGGGGTGGGCCCACTGGAGTTACGCTGGCTCCACTCAGAGCTTATTCCATGGCGAGTACAAGAACTTTGGACCTGGAGCTAATACTACAAAACGAGTTAGCTGGGCCAAACAGCTTACTGAAAAAGAAGTTGAACCCTTCATATCTGTCGATTTCATTGATGGCAAGGAGTGGCTTCCTGCTCACCTATAA 1059 0.4391 MPSSSSPPPSLFIIKPVLCSIVLFLATCPSYVLGTIELQDLVIDSPLLTKNIPANRTIKVDDEGDGEFRSIQAAIDSIPEGNSQWVIVHVRKGVYREKVTIPKNKPYIFLRGNGRGKTAIVWSQSSVDNIESATFKVEAHNVIVFGVSIKNEAPTGVAYTSQNQSVAAFVGADKVGFYHCAFYSTHNTLFDYKGRHYYDECYIQGSIDFIFGRGRSLFHKCEIFVIDDKRTVIKGSITAQNRESESEESGFVFVKGKVYGIGGVYLGRAKGPHSRVIFAKAYLSATIAPEGWAHWSYAGSTQSLFHGEYKNFGPGANTTKRVSWAKQLTEKEVEPFISVDFIDGKEWLPAHL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4208g00003 352 FunFam Pectinesterase 52 352 - -
Pral4208g00003 352 Gene3D - 52 351 IPR012334 -
Pral4208g00003 352 ProSitePatterns Pectinesterase signature 2. 203 212 IPR033131 -
Pral4208g00003 352 SUPERFAMILY Pectin lyase-like 53 350 IPR011050 -
Pral4208g00003 352 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 50 348 - -
Pral4208g00003 352 Pfam Pectinesterase 59 344 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4208g00003 Pral-Chr4208 31071 34208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4208g00003 11 348 Carbohydrate Esterase AT5G47500 36.207 3.37e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4208g00003 - - gmx:100792967 511.146