Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4206g00013 ATGGAGAAATACGATAATTTAGAGAAGATCGGAGAAGGGACTTATGGGAAGGTATACAAGGCGACGGACAAGGCCACTGGGCGGCTGGTGGCTCTGAAGAAGATGCATCTGGAGATTGGTGACCAGGGAATCCCTCCAACTACTCTTCGAGAAATCTCCCTCCTTAAGATGCTCTATATGTCCATCTACGTCGTCCACTTGCTCTCTGTCGAGCTCACTGAGAAGACTTCAAATTCAAAGCCTGTCCTCTTCCTGGTCTTTGAGCACCTTGACACTGATCTTAAGAAGTACATGGATTCCCGCCGCTGTAGTCCCGTCTCTAAGTCTCTTTCTCCTTCCCGTATTCAGAGCTTCCTTTACCAGCTCTGCATGGGTGTTTTTCACTGTCACCGCCATGGTGTCCTCCATCGTGACCTCAAACCCCAAAATCTTCTTCTTGACCAGCGGAGGGGAATTCTCAAGATTGCTGACTTTGGTCTCGGACGAGCCTTGATTTTCCCTCCTAAGAGCTACACACCTGGGGTTGTCACCCTTTGTTACAGAGCTCTTGAGATACTGCTGGGATCTACCCATTACTCCTTTGGGGTTGACATGTGGTCCGTTGGATGCATCTTTGGTGTTTCCGACAGCTCCTTCTTATCTTTCAGGTTGAATATCATTTCTTTAAATCATGCTGCTGATGCTGTAATTTTCATACCAAGAATATGTGGAACTCCAACAGAGGAAGTAAGGCCAGGAGTTACCTCTCTTAGAGATTGGCATGCCTACCCACAGTGGAAGCCACGGAATTTGGGTCTGGCTGCACCATCCTTGGAACCTGACGGAGTAGATCTTCTCTCGGTTTTCGTATGGCCTTAA 858 0.4802 MEKYDNLEKIGEGTYGKVYKATDKATGRLVALKKMHLEIGDQGIPPTTLREISLLKMLYMSIYVVHLLSVELTEKTSNSKPVLFLVFEHLDTDLKKYMDSRRCSPVSKSLSPSRIQSFLYQLCMGVFHCHRHGVLHRDLKPQNLLLDQRRGILKIADFGLGRALIFPPKSYTPGVVTLCYRALEILLGSTHYSFGVDMWSVGCIFGVSDSSFLSFRLNIISLNHAADAVIFIPRICGTPTEEVRPGVTSLRDWHAYPQWKPRNLGLAAPSLEPDGVDLLSVFVWP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4206g00013 285 Pfam Protein kinase domain 4 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00013 285 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00013 285 ProSiteProfiles Protein kinase domain profile. 4 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00013 285 Gene3D Transferase(Phosphotransferase) domain 1 92 282 - -
Pral4206g00013 285 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Pral4206g00013 285 PANTHER CELL DIVISION PROTEIN KINASE 2 280 - -
Pral4206g00013 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pral4206g00013 285 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral4206g00013 285 FunFam Cyclin-dependent kinase 4 1 91 - -
Pral4206g00013 285 SUPERFAMILY Protein kinase-like (PK-like) 1 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4206g00013 Pral-Chr4206 44277 46177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4206g00013 1 280 Core Cell Cycle Gene Families AT3G54180 60.211 1.29e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pral4206g00013 Pkinase 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4206g00013 K07760 - msin:131223745 358.607