Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4206g00012 ATGGAGAAATACGATAATTTAGAGAAGATCGGAGAAGGGACTTATGGGAAGGTATACAAGGCGACGGACAAGGCCACTGGGCGGCTGGTGGCTCTGAAGAAGATGCATCTGGAGATTGGTGACCAGGGAATCCCTCCAACTACTCTTCGAGAAATCTCCCTCCTTAAGATGCTCTATATGTCCATCTACGTCGTCCACTTGCTCTCTGTCGAGCTCACTGAGAAGACTTCAAATTCAAAGCCTGTCCTCTTCCTGGTCTTTGAGCACCTTGACACTGATCTTAAGAAGTACATGGATTCCCGCCGCTGTAGTCCCGTCTCTAAGTCTCTTTCTCCTTCCCGTATTCAGAGCTTCCTTTACCAGCTCTGCATGGGTGTTTTTCACTGTCACCGCCATGGTGTCCTCCATCGTGACCTCAAACCCCAAAATCTTCTTCTTGACCAGCGGAGGGGAATTCTCAAGATTGCTGACTTTGGTCTCGGACGAGCCTTGATTTTCCCTCCTAAGAGCTACACACCTGGGGTTGTCACCCTTTGTTACAGAGCTCTTGAGATACTGCTGGGATCTACCCATTACTCCTTTGGGGTTGACATGTGGTCCGTTGGATGCATCTTTGGTGTTTCCGACAGCTCCTTCTTATCTTTCAGGTTGAATATCATTTCTTTAAATCATGCTGCTGATGCTGTAATTTTCATACCAAGAATATGTGGAACTCCAACAGAGGAAGTAAGGCCAGGAGTTACCTCTCTTAGAGATTGGCATGCCTACCCACAGTGGAAGCCACGGAATTTGGGTCTGGCTGCACCATCCTTGGAACCTGACGGAGTAGATCTTCTCTCGGTTGAAAATGCTCAAGTATAA 861 0.4774 MEKYDNLEKIGEGTYGKVYKATDKATGRLVALKKMHLEIGDQGIPPTTLREISLLKMLYMSIYVVHLLSVELTEKTSNSKPVLFLVFEHLDTDLKKYMDSRRCSPVSKSLSPSRIQSFLYQLCMGVFHCHRHGVLHRDLKPQNLLLDQRRGILKIADFGLGRALIFPPKSYTPGVVTLCYRALEILLGSTHYSFGVDMWSVGCIFGVSDSSFLSFRLNIISLNHAADAVIFIPRICGTPTEEVRPGVTSLRDWHAYPQWKPRNLGLAAPSLEPDGVDLLSVENAQV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4206g00012 286 ProSiteProfiles Protein kinase domain profile. 4 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00012 286 PANTHER CELL DIVISION PROTEIN KINASE 2 280 - -
Pral4206g00012 286 Gene3D Transferase(Phosphotransferase) domain 1 92 281 - -
Pral4206g00012 286 Pfam Protein kinase domain 4 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00012 286 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00012 286 SUPERFAMILY Protein kinase-like (PK-like) 1 279 IPR011009 -
Pral4206g00012 286 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Pral4206g00012 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pral4206g00012 286 FunFam Cyclin-dependent kinase 4 1 91 - -
Pral4206g00012 286 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4206g00012 Pral-Chr4206 43528 46177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4206g00012 1 280 Core Cell Cycle Gene Families AT3G54180 60.211 4.64e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pral4206g00012 Pkinase 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4206g00012 K07760 - msin:131223745 358.607