Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4206g00008 ATGGAGAAATACGATAATTTAGAGAAGATCGGAGAAGGGACTTATGGGAAGGTATACAAGGCGACGGACAAGGCCACTGGGCGGCTGGTGGCTCTGAAGAAGATGCATCTGGAGATTGGTGACCAGGGAATCCCTCCAACTACTCTTCGAGAAATCTCCCTCCTTAAGATGCTCTATATGTCCATCTACGTCGTCCACTTGCTCTCTGTCGAGCTCACTGAGAAGACTTCAAATTCAAAGCCTGTCCTCTTCCTGGTCTTTGAGCACCTTGACACTGATCTTAAGAAGTACATGGATTCCCGCCGCTGTAGTCCCGTCTCTAAGTCTCTTTCTCCTTCCCGTATTCAGAGCTTCCTTTACCAGCTCTGCATGGGTGTTTTTCACTGTCACCGCCATGGTGTCCTCCATCGTGACCTCAAACCCCAAAATCTTCTTCTTGACCAGCGGAGGGGAATTCTCAAGATTGCTGACTTTGGTCTCGGACGAGCCTTGATTTTCCCTCCTAAGAGCTACACACCTGGGGTTGTCACCCTTTGTTACAGAGCTCTTGAGATACTGCTGGGATCTACCCATTACTCCTTTGGGGTTGACATGTGGTCCGTTGGATGCATCTTTGGTGTTTCCGACAGCTCCTTCTTATCTTTCAGGTTGAATATCATTTCTTTAAATCATGCTGCTGATGCTGTAATTTTCATACCAAGAATATGTGGAACTCCAACAGAGGAAGTAAGGCCAGGAGTTACCTCTCTTAGAGATTGGCATGCCTACCCACAGTGGAAGCCACGGAATTTGGGTCTGGCTGCACCATCCTTGGAACCTGACGGAGTAGATCTTCTCTCGAAAATGCTCAAGTATAATCCTGCTGAGAGAACCTCTGCCAAAGAAGCACTTGATCATCCGTACTTTCGCAGCCTTGACAAGTCTCAATTTTAG 933 0.4759 MEKYDNLEKIGEGTYGKVYKATDKATGRLVALKKMHLEIGDQGIPPTTLREISLLKMLYMSIYVVHLLSVELTEKTSNSKPVLFLVFEHLDTDLKKYMDSRRCSPVSKSLSPSRIQSFLYQLCMGVFHCHRHGVLHRDLKPQNLLLDQRRGILKIADFGLGRALIFPPKSYTPGVVTLCYRALEILLGSTHYSFGVDMWSVGCIFGVSDSSFLSFRLNIISLNHAADAVIFIPRICGTPTEEVRPGVTSLRDWHAYPQWKPRNLGLAAPSLEPDGVDLLSKMLKYNPAERTSAKEALDHPYFRSLDKSQF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4206g00008 310 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Pral4206g00008 310 Pfam Protein kinase domain 4 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00008 310 SUPERFAMILY Protein kinase-like (PK-like) 1 305 IPR011009 -
Pral4206g00008 310 FunFam Cyclin-dependent kinase 4 1 91 - -
Pral4206g00008 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pral4206g00008 310 PANTHER CELL DIVISION PROTEIN KINASE 2 302 - -
Pral4206g00008 310 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral4206g00008 310 FunFam Mitogen-activated protein kinase 90 309 - -
Pral4206g00008 310 Gene3D Transferase(Phosphotransferase) domain 1 92 309 - -
Pral4206g00008 310 ProSiteProfiles Protein kinase domain profile. 4 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4206g00008 310 SMART serkin_6 4 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4206g00008 Pral-Chr4206 43287 48521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4206g00008 1 310 Core Cell Cycle Gene Families AT3G54180 63.057 6.19e-138 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pral4206g00008 Pkinase 3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4206g00008 K07760 - msin:131223745 406.371