Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4204g00023 ATGAAACGAGTTGCCAATCTTTCTGGTTGGGATATACCATATCACACATGGCCACAACTTACTGATGACATTGTTAGAGAGGTCAAGAAGAAAGTCCGTGAATTAGTTTATGTTGATACAGACCTAGTAGGAATTCAATCTCAAGTGAACAAAGTAGAAGAGCTTCTTGATTTGGGTTCAAATGATGGGGTTCGAGTTGTGGGTATTTGTGGTATGGGTGGGATAGGAAAGACAACTCTTGCCAGAGTTCTCTATGATGGGATCTCTCACCATTTTGATGCTTCTCATTTCCTACCCAATGTATCTGAATATCATATGAGCCCAGGGTTAATATATCGCAAGAATGTTCTCCTAGTTCTTGATCATGTTCATATTTACTTAAATCTACAACCATTAATCTGGATTATAGATGCCAGTTTGGTGGGGGAAGTAGAATTATCATAA 444 0.3851 MKRVANLSGWDIPYHTWPQLTDDIVREVKKKVRELVYVDTDLVGIQSQVNKVEELLDLGSNDGVRVVGICGMGGIGKTTLARVLYDGISHHFDASHFLPNVSEYHMSPGLIYRKNVLLVLDHVHIYLNLQPLIWIIDASLVGEVELS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4204g00023 147 Pfam NB-ARC domain 46 102 IPR002182 GO:0043531
Pral4204g00023 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 124 IPR027417 -
Pral4204g00023 147 Gene3D - 24 111 IPR027417 -
Pral4204g00023 147 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 110 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4204g00023 Pral-Chr4204 445274 446780 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4204g00023 43 110 WRKY Transcription Factor Family AT5G45050 38.235 1.33e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4204g00023 - - pcin:129316603 151.754