Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4204g00020 ATGGAGAAGGGTAGCCGATCAACGAATAAGCAGATCAATGTTTATGTAAGTTCCAGAGGCGATGAAGTTGATGTTTACGAATTCACCAACAGGCTTTGTGCTGCTTTTGAAAGTGAAATCCACTGGATTTCTCGGTTCCCTGAGTTTCTCATTGTGATACCAATTTTCTACTCTATCGATCCAATCAAGGTGGTAAAGGGTTTTGATACGATCTGGAATGTGGCCAAAAGACTCAGGAATGACAAAAAACTAACAGCAGAGGATATGTTGAGAATCTACCACGATGACCCGAACGAGGCACTATTCTCCATCCAACCAACCATTGACGATTTAATGCGGTTACAATGCTTTTCTAAATATATAGGACGGTTTCAAGAATGGAGGTATGCTATACAAAAAGTGGTGGACCTCCCGGGTTGGGATGTCCGACATGGTCAAAGCTCGCGAGTGATCAAAGGAATTACTAACGAGGTCCTGACACAATTGCATCAAAGAGATTTTCCTTTTGAGATGGTTGGGATGCAATCTCGTGTGGCCGAAGTCAAAAGGCTTTTGAATTTGGGTTTAGATGACAAAGTTGGAATAGTGGGCATTTGTGGTATGGGCGGAATAGGGAAGTCAACTCTTGCTCAGGTATTGTACAGAAGCATTTCTTGCTGTTTTGACGCTTCTTGTTTCCTAGAGCATATGAATGAAGCTTTAACGCAAGATGGTGGATCTCTACAAGAAATTCTTCTTCAGAACCTGGAGACCAGAGATCCAGATGTAAGGTCTATTCTGAAAGGAATGTTCTCAACACACAGAAGTGTAGGACACCACAAGTTTCTCCTAGTTCTTGATGGTGCTGGTTTTGAACAAAATCTGGAAGCAGTGAATTTGATTCGGAAATCTAATTGGTTTGGAAGGGGAAGTAGGATTATCATAACAACTAGAGATGAACGAGTCCTTCAACTATGTGAAGTGGATGCTATTTACAAGCCTAAATTATTGAGTGAGGACGAAGCACTTCAATTATTTTGTGTAAAAGCCTTCAGCCATAACTGTCCTGTGAGAGGATATGAAGAGATGACACATAGTGTGCTTGAATATGCTAATGGCCTTCCATTAGCAATAGTGACTCTGGGTTCATCCTTGTGCCAAAAAAGCGTGCAAGAGTGGAGAAGTGCCTTGGCTCAGTTAAAGAGAATTCCTAATCGTCAAATAACGGAAGTTCTCAAGAAAAGTTTTGATGAGTTAGATCAAATGAACAAGGAAATATTTTTAGATATAGCATGTTTTTTTACAGGGATGAAGATTGATTGGGTAAAGGAAATTCTATTGTGTTGTGGTTTCTCTGCAGAAAGTGGAATTGAAGTTTTGATTGAAAAATCACTCATGAGCATTTCCAATCACAAAATTGAAATGCATAATATGTTGCAAGAAATGGGACGACATATTGTTAGGCAAGAATTCCCTTATGAGCCAACTGAATGGAATAGGTTGTGGCTTCTAGATGATATTGATTATGTTATGCAACAAGATGAAAGCATGGCTGTTGAGAGAGTTGAAGCTATAGTCCTAATTTTGGAAGACTCAAAAAGGGCTGCTTTGAGAATTGAAGCTTTATCAGGCTTGAGCAATCTTAGACTACTTATATTTCATAACGTGAGCTTTTCCGGAACCCTACATTGCATTTCAAACAAGTTACGATATGTTTGGTGGCATCAATATCCTTGCACAAGTTTACCATCAAGCTTTGAGCCTTATGCATTGGTTGAATTGATTTTGCCTGACAGTAAAATTGAAGATATATGGGAAGGCAGAAAGACGCTCCCTAACTTGAAAATCTTGAATCTTAGTGGTTCCAAAAATTTGGTTAAGATGCCAGATTTTGGAGGGGCTCGAAATCTTGAAAGCTTAGATCTTGAAGCATGTACTGGATTATTGCAACTTCATCCATCTATTGCTGAAATATCAAAGCTCAAGCTCTTAAATTTGAGAAGCTGTAGTAATCTTGCTAGTATACCTAATGCCTTGTTTTGTCTAAACAACTTGGAAATGTTAAATCTGGCTTGCTGCTCAAAACTTGCTCATTGTTTGAATTTTTCCCCTTTTGAAGTGCTTGATGAAAATGAAGTAACTCAGCAGCAACCATTTTCTTGTAAGAGACAGAAATTATGTAAACGAAAATCTATTTAA 2178 0.3871 MEKGSRSTNKQINVYVSSRGDEVDVYEFTNRLCAAFESEIHWISRFPEFLIVIPIFYSIDPIKVVKGFDTIWNVAKRLRNDKKLTAEDMLRIYHDDPNEALFSIQPTIDDLMRLQCFSKYIGRFQEWRYAIQKVVDLPGWDVRHGQSSRVIKGITNEVLTQLHQRDFPFEMVGMQSRVAEVKRLLNLGLDDKVGIVGICGMGGIGKSTLAQVLYRSISCCFDASCFLEHMNEALTQDGGSLQEILLQNLETRDPDVRSILKGMFSTHRSVGHHKFLLVLDGAGFEQNLEAVNLIRKSNWFGRGSRIIITTRDERVLQLCEVDAIYKPKLLSEDEALQLFCVKAFSHNCPVRGYEEMTHSVLEYANGLPLAIVTLGSSLCQKSVQEWRSALAQLKRIPNRQITEVLKKSFDELDQMNKEIFLDIACFFTGMKIDWVKEILLCCGFSAESGIEVLIEKSLMSISNHKIEMHNMLQEMGRHIVRQEFPYEPTEWNRLWLLDDIDYVMQQDESMAVERVEAIVLILEDSKRAALRIEALSGLSNLRLLIFHNVSFSGTLHCISNKLRYVWWHQYPCTSLPSSFEPYALVELILPDSKIEDIWEGRKTLPNLKILNLSGSKNLVKMPDFGGARNLESLDLEACTGLLQLHPSIAEISKLKLLNLRSCSNLASIPNALFCLNNLEMLNLACCSKLAHCLNFSPFEVLDENEVTQQQPFSCKRQKLCKRKSI 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4204g00020 725 PRINTS Disease resistance protein signature 602 618 - -
Pral4204g00020 725 PRINTS Disease resistance protein signature 269 283 - -
Pral4204g00020 725 PRINTS Disease resistance protein signature 195 210 - -
Pral4204g00020 725 PRINTS Disease resistance protein signature 364 378 - -
Pral4204g00020 725 Pfam NB-ARC domain 190 414 IPR002182 GO:0043531
Pral4204g00020 725 Gene3D - 41 159 IPR035897 -
Pral4204g00020 725 Pfam Leucine Rich Repeat 584 600 IPR011713 -
Pral4204g00020 725 Gene3D - 160 324 IPR027417 -
Pral4204g00020 725 SUPERFAMILY "Winged helix" DNA-binding domain 400 503 IPR036390 -
Pral4204g00020 725 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 694 IPR044974 GO:0006952
Pral4204g00020 725 SUPERFAMILY L domain-like 519 690 - -
Pral4204g00020 725 Coils Coil 398 418 - -
Pral4204g00020 725 Gene3D - 329 413 IPR042197 -
Pral4204g00020 725 Gene3D Ribonuclease Inhibitor 518 712 IPR032675 -
Pral4204g00020 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 423 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4204g00020 Pral-Chr4204 420692 424092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4204g00020 605 695 WRKY Transcription Factor Family AT5G45050 32.110 2.27e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4204g00020 - - pcin:129300842 574.704