Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4204g00019 ATGGGGAAAGGTAGCCGATCAATGAGGCGGAGCAATGTTTATATAAGTTTCAGAGGCGATGACGTTCATGTTTGTGAATTCACCGATAGGCTTTGTGCTGCTTTTCAAAGTGTAGGTTTAACAACCTTTCCGCACAATAATAAGCGCGCCACAGTGAGCCCATGTCTACCTAAACACCCTCGAAGGGCGATTGATGAATCATGGGTTTCCGTTGTTGTATTCTCCAAAACTTATGTTGGTTCAACACGGTGCTTGCAGCAAGTCGACGAGATTTCTTGGTGGCTTGAGTCACACATTGTGATACCAATTTTCTACTCTATCGATCCAGTCAAGGTGGTAGAGGGTTTTGACATGATCTGGAATATCACCAAAAGATTTAGGAATGACAAAAAACTAACAGCAGAAGAGCTGGTGAAAACCTACAATGATGACCCGACCGAGGCACTATTCTCCATCCAGCCAACCATTGATGATTTGATGCGAATCCGACTTCGTCACCGTGATCGGACCTCCGCGTGGCAACCTGACTTCATTGCAGACTCCAAGTATGCCCGAAAACCTTCATTTTCTAACTATATAGGACAGTTTCAATTATGGAGGAGTGCTATACAAAAAGTGGTGGATCTCCCAGGTTGGGATGTCCGATATGGTTCGCGAGTGATCAAAGGAATTATTAACGATGTGCTGACACAATTGCATCAAAGAGATTTTCCTTTTGAGATGGTTGGGATGCAATCTCGTGTGGCTGAAGTCAAAAAGCTTTTGAATTTAGGTTTAGATGACGAAGTTGGAATAGTGGGCATCTGTGGTATGGGCGGAATAGGGAAGTCAACTCTTGCTCAAGTATTGTACAGAAGCATTTCCCGCTATTTTGACGCTTCTTGTTTCCTAGAGCATATGAGTGAAGCTTTAAGGCAAGATGATCGATCTCTACAAGAAATTCTTCTTCAGAAACTAGAGGCCAGAGATACAGATCTAGAGCCTATTCTGAAAGGAATGTTCTCAACACACACAAGTCCAGGACACCACAAGTTTCTCCTAGTTCTTGATGGTGCTGGTTTTGAACAAAATCTAGAAGCAGTGAATTTGATTGTGAAATCTAATTGGTTACGTGGGGGAAGTAGAATTATCATAACAACTAGAGATGAACGAGTCCTTCAACTATGTGAAGTGGATGCTATTTACAGGCCTAAATTATTGAGTGAGGATGAAGCTCTTCAATTATTTTGTGTAAAAGCCTTCAGCCATAACTGTCCTGTGAGAGGATATGAAGAGATGACACATAGTGTGCTTGAATATGCTAATGGCCTTCCATTAGCAATAGTGACTTTGGGTTCATCCTTGTGCCAAAAAAGCGTGCAAGAGTGGAGAAGTGCCTTGGCTCAGCTAAAGAGAATTCCTAATCGTCAAATAATGGAAGTTCTCAAGAAAAGTTTTGATGAGTTAGATCAGATGAACAAGGAAATATTTTAG 1473 0.4182 MGKGSRSMRRSNVYISFRGDDVHVCEFTDRLCAAFQSVGLTTFPHNNKRATVSPCLPKHPRRAIDESWVSVVVFSKTYVGSTRCLQQVDEISWWLESHIVIPIFYSIDPVKVVEGFDMIWNITKRFRNDKKLTAEELVKTYNDDPTEALFSIQPTIDDLMRIRLRHRDRTSAWQPDFIADSKYARKPSFSNYIGQFQLWRSAIQKVVDLPGWDVRYGSRVIKGIINDVLTQLHQRDFPFEMVGMQSRVAEVKKLLNLGLDDEVGIVGICGMGGIGKSTLAQVLYRSISRYFDASCFLEHMSEALRQDDRSLQEILLQKLEARDTDLEPILKGMFSTHTSPGHHKFLLVLDGAGFEQNLEAVNLIVKSNWLRGGSRIIITTRDERVLQLCEVDAIYRPKLLSEDEALQLFCVKAFSHNCPVRGYEEMTHSVLEYANGLPLAIVTLGSSLCQKSVQEWRSALAQLKRIPNRQIMEVLKKSFDELDQMNKEIF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4204g00019 490 Gene3D - 4 230 IPR035897 -
Pral4204g00019 490 Pfam TIR domain 13 112 IPR000157 GO:0007165
Pral4204g00019 490 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 115 IPR035897 -
Pral4204g00019 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 490 IPR027417 -
Pral4204g00019 490 Pfam NB-ARC domain 250 483 IPR002182 GO:0043531
Pral4204g00019 490 Gene3D - 231 394 IPR027417 -
Pral4204g00019 490 PRINTS Disease resistance protein signature 339 353 - -
Pral4204g00019 490 PRINTS Disease resistance protein signature 434 448 - -
Pral4204g00019 490 PRINTS Disease resistance protein signature 265 280 - -
Pral4204g00019 490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 486 IPR044974 GO:0006952
Pral4204g00019 490 Gene3D - 399 483 IPR042197 -
Pral4204g00019 490 ProSiteProfiles TIR domain profile. 9 149 IPR000157 GO:0007165
Pral4204g00019 490 SMART till_3 10 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4204g00019 Pral-Chr4204 396485 406701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4204g00019 239 490 WRKY Transcription Factor Family AT5G45050 31.225 3.12e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4204g00019 - - pcin:129300842 272.707