Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4204g00018 ATGGATTCCCAGAGCAGCTTATCGTCCAAACCCGTACAAGTTTATTTAAGTTTTAGAGGCGATGACAACTCTCGCAAGTTCACTGATGATCTTCGGTGTGGCATTGAATCTAGGGACTTACAAACCTTGGGGGACGACAAGAAGTTTGAAACAAGAGACTCCATTATTTTGATCCCACCACATCTTCTCAAATCCATCGAAGAATCCTTTATCTTCTTTGTTATCTTCTCCAGAAACTTTGCTTCTTCAATATGGTGCTTGCAAGAATTGTCAAAGATCGCCGATTTCATTAATAATAATGATCCCAAACACACAGTGATACCAATTTTTTATGATGTCGACCCATACGAGGTACAACAACAGATTGGTATCTACGGAAAGGCCTTTGCAGAATACGAGAAAAGTTTCTGTCCTGATTTAGTACGAAAATGGAGACTTGCTATGACGCTAACGGCTAATCTCCCTGGTTGGGTTGTGCAAAATGAACAGATCAAAAAGCACAAACAAGTTATTTTTGACATCCACAAACTGCTCAACACAAAATTACCTGAGGTTGTTTTTGCCGATCATCAACTGATTGGGATGAAGTCTCGTGTGCAAGAAGTAAAAAAGCTTCTTGATTTGGATTCAAATGATGAAGTTCGAGTTGTAGGAATTTGCGGGATGTGTGGAATAGGGAAGACGGCTACAGCTGCGGTTTTGTACAATAAGATCTCTCACCGTTTTGATGCTTCTTATTTTCTTCCTTTTGATGCTTCTTGTTTCCTTCCTGACGCATGCCATGTTTCAAACTCTAATGGTGTATCCCCTCTACAACAATTTTTCCGTCAAACATTGAAGATGGAGGATTTAGAGATAAGGGATATTCAAGAGGGAATTTTCTTGGCGAACCCAAAGCTAAGACACCAAAAGACTCTTATAGTTCTTGATGGGGTTAACCCTACACAAAATCTAGAAACATTGAATTTGGCTGTAAAATCTAATTGGCTTGGTGCTGGGAGTAGAATAATCATAACAACTAGAGATGAACGGCTCCTTAAAGTTCTTGAAGCAAATGATGTTTATAAGGTTGAGCTATTGTCAAAGGATGAATCTCTTCAACTATTTTGCAAGAAAGCTTTCAAATGTAATTTTCTTGTAAAACAACATCAAGAGTACTCAAATAGTGTGCTCCAATATTGCAATGGCCTTCCTTTAGCAATTTCAAGTTTTGGTTCGACCTTGTTTCATCTACGTGCCTCAACATGGATGAGTGACTTGACTAAATCAAGAAAAGATCCTGATCATTGGATGATGGAGATACTCAAAACTTGTTTTGATGAACTAGATCACATGAAGAAGCAGATATTTTTAGATATTGCATGCTTTTTTACTGGGAAGGAAATTAATTATGTAAAGGAAATTTTGCAAGACTGCGGCTTTTCTGCTGAGGAAATCACACTCTTGGTTGAAAGATTTCTCATAGACATTCTGGATCAAAGAATCCGAATGCATGGCATGTTTCAAAAAATGGGACGAGAAATTGTTCGACAAGAATCTCCTCAAGAACCAGGAGAACGAAGTAGGTTATGGTCTTTTGATGATATTTGTCATGTTATGACAAAAAACACAGCCACTGAAAAAGTTGAAGCTATTGTCTTGGATATGGAAGATTCAGAAAGCAGTACATTGAGAATAGAAGCCTTATCACAAATGGGCAACTTAAGACTACTAATATTTCATAATGTGAACTTTGTTGGAACGCTCAATTGCCTTCCTAACAAGCTACGGCATATTTCATGGCATCAATATCCTTTGGCTTGTTTGCCGTCAGGTTTTGAGCCCCATGCACTTGTTGAATTGATTATGCCTGAGAGCAACATCACACAAATATGGGAGGGCAACAAGGTGTTCCCTAAGCTGAGAAATCTGAATCTTCGTGGCTCAAAAAATCTGACCAAGTCCCCAGATTTCAGAGGAACTCCAAATCTTGAGAGAATTTGCCCAATGTTTGAAATTCGCCCCTTTGAGGAGCTCAGTTATTGA 2025 0.3862 MDSQSSLSSKPVQVYLSFRGDDNSRKFTDDLRCGIESRDLQTLGDDKKFETRDSIILIPPHLLKSIEESFIFFVIFSRNFASSIWCLQELSKIADFINNNDPKHTVIPIFYDVDPYEVQQQIGIYGKAFAEYEKSFCPDLVRKWRLAMTLTANLPGWVVQNEQIKKHKQVIFDIHKLLNTKLPEVVFADHQLIGMKSRVQEVKKLLDLDSNDEVRVVGICGMCGIGKTATAAVLYNKISHRFDASYFLPFDASCFLPDACHVSNSNGVSPLQQFFRQTLKMEDLEIRDIQEGIFLANPKLRHQKTLIVLDGVNPTQNLETLNLAVKSNWLGAGSRIIITTRDERLLKVLEANDVYKVELLSKDESLQLFCKKAFKCNFLVKQHQEYSNSVLQYCNGLPLAISSFGSTLFHLRASTWMSDLTKSRKDPDHWMMEILKTCFDELDHMKKQIFLDIACFFTGKEINYVKEILQDCGFSAEEITLLVERFLIDILDQRIRMHGMFQKMGREIVRQESPQEPGERSRLWSFDDICHVMTKNTATEKVEAIVLDMEDSESSTLRIEALSQMGNLRLLIFHNVNFVGTLNCLPNKLRHISWHQYPLACLPSGFEPHALVELIMPESNITQIWEGNKVFPKLRNLNLRGSKNLTKSPDFRGTPNLERICPMFEIRPFEELSY 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4204g00018 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 453 IPR027417 -
Pral4204g00018 674 SUPERFAMILY L domain-like 510 659 - -
Pral4204g00018 674 PRINTS Disease resistance protein signature 629 645 - -
Pral4204g00018 674 PRINTS Disease resistance protein signature 216 231 - -
Pral4204g00018 674 PRINTS Disease resistance protein signature 394 408 - -
Pral4204g00018 674 PRINTS Disease resistance protein signature 299 313 - -
Pral4204g00018 674 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 157 IPR035897 -
Pral4204g00018 674 SUPERFAMILY "Winged helix" DNA-binding domain 432 533 IPR036390 -
Pral4204g00018 674 Pfam TIR domain 13 174 IPR000157 GO:0007165
Pral4204g00018 674 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 660 IPR044974 GO:0006952
Pral4204g00018 674 Gene3D Ribonuclease Inhibitor 529 664 IPR032675 -
Pral4204g00018 674 Pfam NB-ARC domain 198 410 IPR002182 GO:0043531
Pral4204g00018 674 ProSiteProfiles TIR domain profile. 10 148 IPR000157 GO:0007165
Pral4204g00018 674 Gene3D - 179 357 IPR027417 -
Pral4204g00018 674 Gene3D - 359 443 IPR042197 -
Pral4204g00018 674 Pfam Leucine Rich Repeat 611 629 IPR011713 -
Pral4204g00018 674 SMART till_3 11 154 IPR000157 GO:0007165
Pral4204g00018 674 Gene3D - 4 178 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4204g00018 Pral-Chr4204 363700 367868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4204g00018 94 660 WRKY Transcription Factor Family AT4G12020 31.040 1.60e-64 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4204g00018 - - pcin:129300842 511.146