Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4204g00013 ATGGACCTGAAGTCAAATCATACTCCTGTTCTTACTGATGCTGCACCCATAACGAAATCGAGATTGGGCGTGCATTCCAGTCTGTTGCCTTATTCTCCAACAGGGGCAGCTTTTCCATCTGCCCTGCTTCTGACAATCCCTAGGAAGAAGGCAGGATTTCTTGATGATGTTCGTTCTAGTGGTTGGCTGGATGCCATGAAATCATCTTCTCCTACAGCCAAGAAGATAACAAAGGATATTAATCATGGTTTTGCATCGTCTGATGCTGATAGCGCTTACGCTACCTGGCTGCTAAAGTATCCATCAGCACTTACGTCTTTTGAGCAAATTGCAAACTATGCAAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAAGTGGCAGAGCTTTTTCCCACTGCAATAATTAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTAGGACTAACTGAACTCCATTACGCTGGTAGCCATGGGATGGATATCATTGGTCCTGTCAGACAATCTGTATCTGATAACCATCCTAATTGCATTAGGTCTACTGACAATCAGGGAAAGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCTTGCCCATGATTGATGAGGTGTTTAATTCCCTTATTGAATGTACAAAAGACATTAAAGGTGTAAAAGTTGAGAGCAACAAATTTTGTGTCTCTGTACACTATCGCAACGTAGAGGAGAAGAATTGGAATATGGTGGGGCAAAAAGTCCATGATATTCTGAAAGACTATCCACGCTTGCGATTGACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGTGATCAACTGGGATAAGGGCAAAGCTGTCACATTTTTACTTGAGTCACTTGGGCTTAGCAACTGTGATGATGTGCTCCCTATATATGTTGGAGATGATCGGACTGATGAAGATGCTTTTAAGGTATGA 1014 0.4211 MDLKSNHTPVLTDAAPITKSRLGVHSSLLPYSPTGAAFPSALLLTIPRKKAGFLDDVRSSGWLDAMKSSSPTAKKITKDINHGFASSDADSAYATWLLKYPSALTSFEQIANYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAELFPTAIISGRSRDKVYEFVGLTELHYAGSHGMDIIGPVRQSVSDNHPNCIRSTDNQGKEVNLFQPAAEFLPMIDEVFNSLIECTKDIKGVKVESNKFCVSVHYRNVEEKNWNMVGQKVHDILKDYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4204g00013 337 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 337 IPR044651 GO:0004805|GO:0005992
Pral4204g00013 337 Gene3D - 202 296 - -
Pral4204g00013 337 FunFam Trehalose 6-phosphate phosphatase 220 296 - -
Pral4204g00013 337 FunFam Trehalose 6-phosphate phosphatase RA3 119 259 - -
Pral4204g00013 337 NCBIfam trehalose-phosphatase 116 337 IPR003337 GO:0003824|GO:0005992
Pral4204g00013 337 Gene3D - 121 337 IPR023214 -
Pral4204g00013 337 Pfam Trehalose-phosphatase 122 337 IPR003337 GO:0003824|GO:0005992
Pral4204g00013 337 NCBIfam HAD-IIB family hydrolase 121 337 IPR006379 -
Pral4204g00013 337 SUPERFAMILY HAD-like 120 337 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4204g00013 Pral-Chr4204 282379 287832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4204g00013 113 336 Trehalose Biosynthesis Gene Families AT1G70290 26.582 4.08e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4204g00013 K01087 - gmx:100819495 602.438