Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4204g00012 ATGGACCTGAAGTCAAATCATACTCCTGTTCTTACTGATGCTGCACCCATAACGAAATCGAGATTGGGCGTGCATTCCAGTCTGTTGCCTTATTCTCCAACAGGGGCAGCTTTTCCATCTGCCCTGCTTCTGACAATCCCTAGGAAGAAGGCAGGATTTCTTGATGATGTTCGTTCTAGTGGTTGGCTGGATGCCATGAAATCATCTTCTCCTACAGCCAAGAAGATAACAAAGGATATTAATCATGGTTTTGCATCGTCTGATGCTGATAGCGCTTACGCTACCTGGCTGCTAAAGTATCCATCAGCACTTACGTCTTTTGAGCAAATTGCAAACTATGCAAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAAGTGGCAGAGCTTTTTCCCACTGCAATAATTAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTAGGACTAACTGAACTCCATTACGCTGGTAGCCATGGGATGGATATCATTGGTCCTGTCAGACAATCTGTATCTGATAACCATCCTAATTGCATTAGGTCTACTGACAATCAGGGAAAGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCTTGCCCATGATTGATGAGGTGTTTAATTCCCTTATTGAATGTACAAAAGACATTAAAGGTGTAAAAGTTGAGAGCAACAAATTTTGTGTCTCTGTACACTATCGCAACGTAGAGGAGAAGAATTGGAATATGGTGGGGCAAAAAGTCCATGATATTCTGAAAGACTATCCACGCTTGCGATTGACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGTGATCAACTGGGATAAGGGCAAAGCTGTCACATTTTTACTTGAGTCACTTGGGCTTAGCAACTGTGATGATGTGCTCCCTATATATGTTGGAGATGATCGGACTGATGAAGATGCTTTTAAGGTTTTGAGGGAGGGGAATAAAGGTTATGGCATCCTAGTTGCTTCTGCACCGAAGGAAAGCAATGCAGTCTACTCTCTCCGTGATCCATCAGAGGTCATGGAATTTCTCAAGTCTCTTGTGTTTTGGAACTCAGGCCTCCTTAAAAGTTACATATAG 1164 0.4244 MDLKSNHTPVLTDAAPITKSRLGVHSSLLPYSPTGAAFPSALLLTIPRKKAGFLDDVRSSGWLDAMKSSSPTAKKITKDINHGFASSDADSAYATWLLKYPSALTSFEQIANYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAELFPTAIISGRSRDKVYEFVGLTELHYAGSHGMDIIGPVRQSVSDNHPNCIRSTDNQGKEVNLFQPAAEFLPMIDEVFNSLIECTKDIKGVKVESNKFCVSVHYRNVEEKNWNMVGQKVHDILKDYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNKGYGILVASAPKESNAVYSLRDPSEVMEFLKSLVFWNSGLLKSYI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4204g00012 387 Gene3D - 119 211 IPR023214 -
Pral4204g00012 387 Gene3D - 224 381 IPR023214 -
Pral4204g00012 387 FunFam Trehalose 6-phosphate phosphatase 220 296 - -
Pral4204g00012 387 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Pral4204g00012 387 CDD HAD_TPP 120 370 - -
Pral4204g00012 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
Pral4204g00012 387 SUPERFAMILY HAD-like 120 377 IPR036412 -
Pral4204g00012 387 NCBIfam trehalose-phosphatase 216 376 IPR003337 GO:0003824|GO:0005992
Pral4204g00012 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 379 IPR044651 GO:0004805|GO:0005992
Pral4204g00012 387 Pfam Trehalose-phosphatase 122 366 IPR003337 GO:0003824|GO:0005992
Pral4204g00012 387 FunFam Trehalose 6-phosphate phosphatase 119 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4204g00012 Pral-Chr4204 281079 284694 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4204g00012 113 375 Trehalose Biosynthesis Gene Families AT1G70290 26.148 9.77e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4204g00012 K01087 - gmx:100819495 686.411