Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4201g00037 GCACATCAGTATTGTACAAAAAATGGCTCCTACTGCAAAAAATTTATCGAAGACTTGAACTCCAGCAAAGACACATGGAGTTTGCATGCGAAGATTGTCAGGAAATGGCCGGTGCCCAGAAAGATCCCTCCTTATGCTGTGTGGAAGGTATCCATGCTATTAGTGGATGAACAGGAAAGTAGGATTGAAGCATTTACCACTCAGAAATCACTAATTAGACGTATCATTGAAGAACTTCGGGAGGGGGTAGTGTATCATTTTGAGAACTTTGAAGTGCTCCTTAACAAAGATGAGTACAAGGTTACAGATTGTAAATATAAGTTAAGCTTTCATTGTTCAACATCGATCGAGGAAAGTGATCTTTCAATTCCATTTGATGCATTCAACTTCGTTACAATCAAGGATGTTGCTGAGTTTAATGCCAACAATGAAGACTTGATAGATGTTATTGGGTTTTTACAATCATTTGGAGATTTGAAGGATCATAAAAAAGAAGGGGGTAGTACAAGGAAGCTCAGTTTCACAATTGCGGATGAGAATGAGAGATCTGTCAATGTGGTAGTATTCGGTCAGTGTGCCAATGAAATATTTAGAGCCAAAGGGGAAGACTTACAACCACCTATTGTTGTGCTCCTTCGTTTTGCAAGAATCAACAGGGGAAAAGGTTTCGGACATTTAACTAATCAGTTTGAGGGGACCAAGGTAGTTTTCAATCCTGACCTCCCTGAGACCAAGAAACTACTTGACAGTCTTGAAGATAATCCAGTTGCAAGTCAAAGTTTATCCCAGGTATCAAGCTGTGTCATTGCAACTGCTACAAATGAGTCACTCTTAAGTTTCCCTTGCAGGATTAATGTAGCTCAGATAATGAACTTCACTGAGCCATGTGAGGTTGTCACTAAGTTGGTCATTGAGAAGCTTGAAACAGCATATGGTTGGAATTACGATGGATGTCCATGTGATAAAAAACCATTCTATGTCAATGGGAAACTTAAGTGTAGCGCATGCAACACAGAAGTCAAGATGACTGAACCCAAGTTCAAAGTTCATTACAAAGCAAGGGATTCCACTGGTAAATGTTCAATCATTTTTTTCAATCGCTTAGCTTCTCAGTTATTGAACTGTGTTGCTGCCGACCTCAAGGATCAAATGATTAAGATGGGCAAGCCTATGGGATTTCCTAAAGAGCTGTCCGATTGCATAGGGAAGGAAGTCCTGGTCAAACTTAAAATCAAGGACTTCAACATCGGTCACCCCAATAGTAGCATGGGTGTCTCACAGTTTTCTGATGATATGCACATAATCGAAAAGTTCACATATAGCGAATACCAGGAAAATCCTCCAACTCTAACTGAGGCTTCGCCGGTTGAATCGAGTGCGTCAAAATCCTCTCCAAAAATTGTCCTTGTGGAGGCAGAAGAAGATGATGACCTGACTGATTCACAGATTGTCACTCCAGAGGACACTAATGCAAAGAGGAGGAAACTGAGCAAAACCATCTCCCAAGCAGTTGATGACGGTGATGATCATGATAAGGCATATCAGAATATCTCATCAGTTGAAATGCAGATGAAGGAATGCCGATCTCAACATGATGGCGCACAGAACATAATTCAGGATCATTTCTCTATAAGGTCTAAAGCGGTTTATGAAACTCCAACGAAACCAATTTTACCCGACATTACTAATTCCCAAACCCTTTACAAAGAAGGAGGCTTTGAGGTTAATCCAACTTCATTTGCAAATCATGCTCAACCGGAAGACATTCAATATTTCTCAACCAATGGGGAAAGAGCTTTTTGTCCCAAGAGACGTCGTATTGAGAATGTCTCAAGTCTTGCTGAGAATCTAACCCATGAGCTTTATCATGACACCAGAAGAGAGGATATTTCAGCCTCAGAAGGTATTCAAGGAGATGACCACTTATATGATTCATTTAATATCAACCTTGATGGCTATCTTGATGAGGGAAATCCAGAATTTGAATGTCAATATTGTGGAGCTATGCTATGGTTCAATGAGAGAATAAAGAGAGCTCCATCTAATGAACGGCCAATTTTTTCAATATGTTGCTCCCATGGTAAAGTGTCTGTACCTCATTTACAGACTCCTCCTGAACAGCTCCGTAAACTTTTCTTTGACAAAGGTGATCCAAAATCCAAAAAGTTCCAATCAAGCATTAGAGCATATAATAATATGTTCTGCTTCACTTCAATGGGAGGGAAGATTAACCATTCTCTAAACAGTAATGGTGGGGGACCTTACACCTTTGTCATATCTGGACAGAACCACCACTATATAGGTAGTTTATTACCTGAAGAAGGAGCTAATCCAGTGTACTCTCAATTATATATTTATGATACGGAGCATGAAATAGCAAATCGGCTTTCAGCAATCAGGCATGCATCTAATATACTGAAGAGGGATCGCCATGCAAATGTCAAGATTTGCTTGATAAGGCATATGGGCCCTGACAATAGATGTTATAATCTTCCAACATCATCAGAAGTTGCTGCACTAATAGTTGGTGATTTTGACAGATCATATCACAAGAGAGATATTGTTGTGGAAAAACAAGGGACGCTCAAACGAATAGATGAATTTCACAGGTCATACCTACCATTACAGTACCCACTGTTATTTCATTTTGGAAATAATGGTTATGATCCAAATATTATGCACTCTACTCAATCTCTCTACCACACAAGGAAGAAGAAAAAATTGACTATTAGAAGAAGAGGTGAAACAAATGCATCAATGATTGGAAGAAGAGTTGTTCTTCCATCTTCATTTATAGGTGGTGCAAGATACATGGTGAACAATTTTCAGGATGCAATGGCAATTTGTAAATATGCAGGTTATCCAGATATATTCTTAACATTCACTTGTAATCCTGCTTGGCCGGAAGTAAAGCGTTACTGTACCGATTATGAGCTTAATCAATCAGATTGTCCGCAAATTTTATCAAGGATATTTAAATTGAAATTAGATGCTCTCATGAAAGTTATTAGGGAACAAAAAATATTCGGCAAGATTAGGGCAGAAATATACACAATCGAGTTTCAAAAGAGAGGATTGCCCCATGCTCATATCATTCTCTTCCTTGAACATGATGACAAGCCCAGAACACCAGAAGATGTGGATAAATTAATATGTGCAGAAATACCAGATAAAGAGTTAGATCCTGAGTTATATGAGCTCGTGGGTAATTACATGATTCATGGTCCATGTGGACACTCTAACAAGAATTCACCTTGCATGAAAGATGGAAAATGCTCGAAGTACTTTCCAAAAAAATATGTCGACAATACAGCTGTTGATGAAGAAGGGTACCCTACATACAGGAGGCGCAAAGATGGAAGGACTATAGAAAAAAAGGGCATACCATTAGATAATAGGTTTGTTGTGCCTTACAATCCACATTTGCTTAGATTATTCCGGGCTCATATTAATGTTGAAAAAACAAACCAGTCAAGAGCAGTCAAATACCTTTTCAAGTACATTAGCAAGGGGAATGACAGAGTTGTTGCAGGGATTTACAGCAATCCTGATACAAGTAGCTCAGAAACTTCATTCGATGAGATATCACATTATCTCAATTGTAGATATGTTTCACCTTGTGAAGCTGCATGGCGTATATTTGCTTTTGACATTCATCATAGATATCCTTCTGTCGAGCGTCTATCCTTTCACTTGCCAGAACAGCAAGTAGTCTACTACTCTGGGAAGTCATCTGTATCATCATTACTAGACAAGCCAAGGATGAAAGAATCGATGTTCTTAGCCTGGATGGACTTGAACAAATCTGGTGGGCTTGCAAAAACAATGACATACATACAGATTCCACAATACTATACTTTTGATAAGAATCAGAGAATATGGAAACCAAGGCAACGAGGATTTGCAGTTGGGAGATTAGCACATGCATCACCAACACAGGGAGAGATCTATTATTTGCGGGTTCTCCTCACCAAAGCACGAGGACCTAAATCGTATGAGGACATTAGAACTGTCGATGGTATTATCCATCCAACTTTTAAATCTGCATGTTATGCCCTTGGTTTGCTCAACGATGATCAAGAATTTATTGATGCAATCAAGGAGGCCTCAATCTGGGCATCTAGACATTACCTCAGAAAATTCTTTGTTAGTATGCTACTTTGCAACTGCTTATCACAACCACTTTTAGTTTGGCAGAAATCTAAGCAACTTATTTTTGAAGATATGTTGTATGTTGCCAGACCTCAACAACAACTATCAGGAATTAGTATAACTGATGATGAGAAGGAGGAAGTTGCACTGATTGAAATTGAAAGATTACTCAAGAGGAACGGGAAATCTTTGAGTGATTTCCCTTCAATGCCAAAGCCAAAAACAGATACACATATTGATATGAGGAACCATTTATTATTGCAGGAGCTGAACTATGACAGAGACAGCTGTAGATCTGAATCATATAAGTTAAGAGCTTCCTTAACAGATGAGCAATTGAATATATTCAATGAGATCTTGAATGCAATTGACTCATCAAATGAAAATTTCTTTTTTGTTTATGGTTTTGGAGGTACTGGGAAGACATTCTTGTGGAATGCATTGACTGCAACTATTAGGGGAAGAGGTGAAATAGTGATAAACGTTGCATCAAGTGGGATTGCAGCAACGTTATTACCATCAGGCAGGACAGCTCACTCCAGGTTTGCAATACCAATAGATATAACTGAGGAATCAATGTGCAACATATCACACAACTCACCAATGTCTAACCTCATTAGAAATACAAAGTTATTCATATGGGATGAAGCTCCCATGGTTAGGAGATATTGCATTGAAGCTGTTGATAGAACATTTAAAGATATCATGAAGTGTGACCATCCATTTGGGGGAAAGTGTGTTGTCATGGGTGGAGACTTTAGACAAATATTGCCGGTTGTTCCAAAAGGAGGCCGTGCTGATATTGTTGATGCATCAATCAATTCATCTGAACTATGGAATCATTGTAGAATGTTTCAACTTACGAAAAACATGCGCCTATTATCAAGTGGAGATCATGGTGACAATTTGAAAGTCCAACAATTCTCAGAGTGGTTGCTTCAAGTTGGTGAAGGTAAAATAGGACTGCCAAATGAAGGTGTTACAGATATTGAGATTCCAAGTGAGATACTAATCCAATCATCTGATAATCATATTCAATCCATTGTGTCTGTTACTTATCCAAACTTAAAATACCATATCAATAATTCTGAATATCTGACCAACAGAGCAATCCTTGCACCAACTATTGAAGTGGTTGATCAAATAAATGATCATGTTTGTTCAATGCTTGATGGTGAATATGTAGAGTACTTCAGCTCAGATTCAATAACTGCTGCTGATCAAGACGTAGAGTTCCAAGAATTATACACTACTGAATTCTTAAACACCATCAACTGTTCTGGTCTTCCTCCTCATAGATTAGCATTGAAAGTAGGATGTCCTGTCATGCTCATCAGGAACATTGATCAAGCATCTGGTCTTTGTAATGGGACAAGACTTCAAACTACTTTCCTTGGTAAACATTTCATCAAAGCTATAGCATTGAATGGCACAAGTGTTGGTCAAGAAGTCCTCATCCATCGCATGGATATGAATCCATCTGAAACTAAGCTTCCATTCACAATGGTAAGGAGGCAATTCCCCCTCATTATTTCATTTGCAATGACCATAAATAAGAGTCAAGGACAATCAATGACTAATGTTGGTTTATATCTTCCAAGGCCAGTATTCTCACATGGGCAGCTGTATGTAGCAATGTCAAGGGTCAGAAGAATTGATGGTCTAAAGGTGTTGATCGTTGATTCGAATAATAAATCAACCAACATTACTACCAATGTTGTATACAGAGAGATATTTCAGAATGTTCATTGTCATTAG 5910 0.3849 AHQYCTKNGSYCKKFIEDLNSSKDTWSLHAKIVRKWPVPRKIPPYAVWKVSMLLVDEQESRIEAFTTQKSLIRRIIEELREGVVYHFENFEVLLNKDEYKVTDCKYKLSFHCSTSIEESDLSIPFDAFNFVTIKDVAEFNANNEDLIDVIGFLQSFGDLKDHKKEGGSTRKLSFTIADENERSVNVVVFGQCANEIFRAKGEDLQPPIVVLLRFARINRGKGFGHLTNQFEGTKVVFNPDLPETKKLLDSLEDNPVASQSLSQVSSCVIATATNESLLSFPCRINVAQIMNFTEPCEVVTKLVIEKLETAYGWNYDGCPCDKKPFYVNGKLKCSACNTEVKMTEPKFKVHYKARDSTGKCSIIFFNRLASQLLNCVAADLKDQMIKMGKPMGFPKELSDCIGKEVLVKLKIKDFNIGHPNSSMGVSQFSDDMHIIEKFTYSEYQENPPTLTEASPVESSASKSSPKIVLVEAEEDDDLTDSQIVTPEDTNAKRRKLSKTISQAVDDGDDHDKAYQNISSVEMQMKECRSQHDGAQNIIQDHFSIRSKAVYETPTKPILPDITNSQTLYKEGGFEVNPTSFANHAQPEDIQYFSTNGERAFCPKRRRIENVSSLAENLTHELYHDTRREDISASEGIQGDDHLYDSFNINLDGYLDEGNPEFECQYCGAMLWFNERIKRAPSNERPIFSICCSHGKVSVPHLQTPPEQLRKLFFDKGDPKSKKFQSSIRAYNNMFCFTSMGGKINHSLNSNGGGPYTFVISGQNHHYIGSLLPEEGANPVYSQLYIYDTEHEIANRLSAIRHASNILKRDRHANVKICLIRHMGPDNRCYNLPTSSEVAALIVGDFDRSYHKRDIVVEKQGTLKRIDEFHRSYLPLQYPLLFHFGNNGYDPNIMHSTQSLYHTRKKKKLTIRRRGETNASMIGRRVVLPSSFIGGARYMVNNFQDAMAICKYAGYPDIFLTFTCNPAWPEVKRYCTDYELNQSDCPQILSRIFKLKLDALMKVIREQKIFGKIRAEIYTIEFQKRGLPHAHIILFLEHDDKPRTPEDVDKLICAEIPDKELDPELYELVGNYMIHGPCGHSNKNSPCMKDGKCSKYFPKKYVDNTAVDEEGYPTYRRRKDGRTIEKKGIPLDNRFVVPYNPHLLRLFRAHINVEKTNQSRAVKYLFKYISKGNDRVVAGIYSNPDTSSSETSFDEISHYLNCRYVSPCEAAWRIFAFDIHHRYPSVERLSFHLPEQQVVYYSGKSSVSSLLDKPRMKESMFLAWMDLNKSGGLAKTMTYIQIPQYYTFDKNQRIWKPRQRGFAVGRLAHASPTQGEIYYLRVLLTKARGPKSYEDIRTVDGIIHPTFKSACYALGLLNDDQEFIDAIKEASIWASRHYLRKFFVSMLLCNCLSQPLLVWQKSKQLIFEDMLYVARPQQQLSGISITDDEKEEVALIEIERLLKRNGKSLSDFPSMPKPKTDTHIDMRNHLLLQELNYDRDSCRSESYKLRASLTDEQLNIFNEILNAIDSSNENFFFVYGFGGTGKTFLWNALTATIRGRGEIVINVASSGIAATLLPSGRTAHSRFAIPIDITEESMCNISHNSPMSNLIRNTKLFIWDEAPMVRRYCIEAVDRTFKDIMKCDHPFGGKCVVMGGDFRQILPVVPKGGRADIVDASINSSELWNHCRMFQLTKNMRLLSSGDHGDNLKVQQFSEWLLQVGEGKIGLPNEGVTDIEIPSEILIQSSDNHIQSIVSVTYPNLKYHINNSEYLTNRAILAPTIEVVDQINDHVCSMLDGEYVEYFSSDSITAADQDVEFQELYTTEFLNTINCSGLPPHRLALKVGCPVMLIRNIDQASGLCNGTRLQTTFLGKHFIKAIALNGTSVGQEVLIHRMDMNPSETKLPFTMVRRQFPLIISFAMTINKSQGQSMTNVGLYLPRPVFSHGQLYVAMSRVRRIDGLKVLIVDSNNKSTNITTNVVYREIFQNVHCH 1969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4201g00037 1969 SUPERFAMILY Nucleic acid-binding proteins 304 413 IPR012340 -
Pral4201g00037 1969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1623 1965 IPR027417 -
Pral4201g00037 1969 Gene3D - 122 259 IPR012340 -
Pral4201g00037 1969 Pfam Helitron helicase-like domain at N-terminus 912 1033 IPR025476 -
Pral4201g00037 1969 Pfam Replication factor-A C terminal domain 304 413 IPR013955 -
Pral4201g00037 1969 PANTHER UNCHARACTERIZED 909 1945 - -
Pral4201g00037 1969 SUPERFAMILY Nucleic acid-binding proteins 128 252 IPR012340 -
Pral4201g00037 1969 CDD RPA1_DBD_B_like 148 244 - -
Pral4201g00037 1969 Gene3D - 15 120 IPR012340 -
Pral4201g00037 1969 SUPERFAMILY Nucleic acid-binding proteins 16 119 IPR012340 -
Pral4201g00037 1969 Pfam Domain of unknown function DUF223 52 143 IPR003871 -
Pral4201g00037 1969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1441 1676 IPR027417 -
Pral4201g00037 1969 CDD SF1_C_RecD 1896 1935 - -
Pral4201g00037 1969 CDD RPA1_DBD_A_like 27 116 - -
Pral4201g00037 1969 Pfam PIF1-like helicase 1492 1847 IPR010285 GO:0000723|GO:0003678|GO:0006281
Pral4201g00037 1969 Gene3D - 1489 1673 IPR027417 -
Pral4201g00037 1969 MobiDBLite consensus disorder prediction 446 465 - -
Pral4201g00037 1969 Gene3D - 273 435 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4201g00037 Pral-Chr4201 520209 529869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4201g00037 54 411 Core DNA Replication Machinery Family AT5G08020 23.784 1.94e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4201g00037 - - pcin:129302583 1443.33