Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4201g00033 ATGGCAGGAACTTCTGCTTCACCTAAAGCTTTGTCTTCCCCAGAAAGAAATGGCAACAGTACATCAAGAACAGTCATAATCGTGGCTGTGTCTATTGGTGCTTTTATCGCGATTCTTGTATTGATCTGCATCTATTTTATGGTTCGGAGATCGAAGAAAACAATTGAAACTGATCAACCTGAAGCAAAGGATGATGATGATGAAATTAAACCAATTGAGTCACTGCAATTTAATTTCAACACCATAAGACTCGCCACAGATAACTTCTCTATTGCCAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATATAAGGGCAAGCTTCCAAATGGGCAAGACATTGCTGTTAAAAGGTTGTCCATGGATTCCGGCCAAGGAGATTTAGAATTTAAAAATGAAGTGCTTTTGGTGGCTAAACTCCAACATCGCAATTTAGTGAGATTATTGGGCTTCTCCTTGGAAAAGAAAGAAAGGCTATTGGTATATGAGTTTCTTCCCAATAGAAGCCTTGATTACTTATTGTTTGATACGAATGAGAGTGTTCATTTGAATTGGGTTATGCGCCACAAAATCATAGGAGGCATTGCTCGTGGCCTTCTTTACCTTCATGAAGATTCAAGATTACGTATTATTCATCGAGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTAAATCCCAAAATATCAGATTTTGGTATGGCAAGACTATTTGTTGTTGACCAAACTCAAAGCAATACCAGCAGAATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCCATCAAATCAGATGTTTTCAGTTTTGGCATATTGGTTCTAGAGATTGTAAGTGGCAAAAAGAACAACAGTGTCTTTGATGAAGAGAACGCCCATGATCTATTAAGCTATGCATGGAAAAATTGGAGAGACGGGACGGCTTTCAATTTAGCAGATCCTATATTAAACAATGGTTCAAGAAATGAAATAATGAGATGCATCCATATTGGGTTATTATGTGTTCAAGAAAATGTGGCTGATAGGCCAACCATGGCTTCAGTTGTAGTTATGCTGAATAGCTACTCTTCCTCTCTTCCCTTTCCTTCAAAGCCTCCACTTTTAATAAACACCAGAGGTTCATCAGAGATACATTTAAGGGAGTACAGTTCAGAAGCAACAAGATCAAATGAAGGAGGAAATAACTCTATTCAACAATCAGTAAATGAAGCATCAATTACTGAACTATATCCACGTTAG 1260 0.3762 MAGTSASPKALSSPERNGNSTSRTVIIVAVSIGAFIAILVLICIYFMVRRSKKTIETDQPEAKDDDDEIKPIESLQFNFNTIRLATDNFSIANKLGQGGFGSVYKGKLPNGQDIAVKRLSMDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSLEKKERLLVYEFLPNRSLDYLLFDTNESVHLNWVMRHKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVVDQTQSNTSRIVGTYGYMAPEYAMHGQFSIKSDVFSFGILVLEIVSGKKNNSVFDEENAHDLLSYAWKNWRDGTAFNLADPILNNGSRNEIMRCIHIGLLCVQENVADRPTMASVVVMLNSYSSSLPFPSKPPLLINTRGSSEIHLREYSSEATRSNEGGNNSIQQSVNEASITELYPR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4201g00033 419 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 418 - -
Pral4201g00033 419 FunFam cysteine-rich receptor-like protein kinase 10 165 366 - -
Pral4201g00033 419 Gene3D Transferase(Phosphotransferase) domain 1 165 367 - -
Pral4201g00033 419 ProSiteProfiles Protein kinase domain profile. 89 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00033 419 SUPERFAMILY Protein kinase-like (PK-like) 74 383 IPR011009 -
Pral4201g00033 419 CDD STKc_IRAK 95 360 - -
Pral4201g00033 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Pral4201g00033 419 FunFam Cysteine-rich receptor-like protein kinase 10 49 164 - -
Pral4201g00033 419 Pfam Protein tyrosine and serine/threonine kinase 91 357 IPR001245 GO:0004672|GO:0006468
Pral4201g00033 419 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Pral4201g00033 419 MobiDBLite consensus disorder prediction 390 419 - -
Pral4201g00033 419 MobiDBLite consensus disorder prediction 393 413 - -
Pral4201g00033 419 SMART serkin_6 89 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00033 419 Gene3D Phosphorylase Kinase; domain 1 50 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4201g00033 Pral-Chr4201 488139 490896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4201g00033 7 419 Receptor kinase-like Gene Family AT4G21410 54.481 1.04e-158 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4201g00033 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4201g00033 - - qsa:O6P43_031179 562.377