Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4201g00030 ATGACAACCATTATTTCAATCGCTTTGCTTTCTTTCTTTTCTCATTTCATCGTTCTCACTACAGCCCAGCAAGACTTCATATACCATTTGTGTTACAACGATGTTGGTAACTACACAAGCACGAGTTCCTACGACACAAACCTTAAAACCCTTCTTTCTAATCTCACTTCGGACCCAAAAGTTGATTATGGCTATTACACTTCCTCTGAAGGCCAAAATCCTAATAGGGTCAACGCTCTTGGACTGTGCAGAGCAGATGTTAAGCCAGATTCTTGTCGTACTTGCCTCAACAATGCCACAATCCTTCTACGAAAGCTATGTCCAAATCAAAAGGAAGCATATGGATACAACGATGGGTGCATTTTACGATACGCTAATCGCTCCATGTTTGGGATAAACCAAGACTCAGATTTTTCAATCTTCATGTGCAACCCTAGTAATGCAACAGACAACTACAATGAAGTGCTTGATGGTCTGATGCGAAGGCTGAGAGGCAAAGCCACCGCCGGCGACAGTCGCAGGAAGTTTGCTGCCGGTACGGTGGCGGCTTTGTTTCAAACTGTATATGGTTTTGCTCAGTGCATGCCTGATTTGGCTGAGCAAGATTGTGATGACTGCTTGGAGAAGGCAATCTCGAGCATTCCCAGATTGTGTAACAACAGGATCGGTGGACGGATAATCAAACTGAGTTGCAACGTTAGATATGAGAATTATCGCTTCTATGATGATGTGGTTCTTGATTCATTATCTTCATCTCCTCCGGCTGCTTCACCATCCAACACATCTTCCTCACAAGGGAATGGCCACAGTACATCAAGAACAGTCATAATCGTGGCTGTGTCTATCGGAGCTTTTGTCGCAATTCTTATTTTGATTTGCATCTATTTTGTGGTTCGGAGATCGAAGAAACCAATTGAAACTGATCAACCTGAAGCAGAGCATGATGAAATTAAACCAATTGAGTCACTGCAATTCAATTTCAACACTATAAAGCTCGCCACAGATAACTTCTCTATTGCAAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATATAAGGGCAAGCTTCCAAATGGGCAAGATATTGCTGTTAAAAGGTTGTCCATGGATTCTGGCCAAGGAGATTCAGAATTTAAAAATGAAGTGCTTTTGGTGGCTAAACTCCAACATCGCAATTTAGTGAGATTATTGGGCTTCTCCTTAGAAAAGAAAGAAAGGCTATTGGCATATGAGTTTCTTCCCAATAGAAGTCTTGATTACTTATTGTTTGATTCAAATCAACGTGTTCATTTGAATTGGATAATACGCTACAAAATCATAGGAGGCATTGCTCGTGGCCTTCTTTATCTTCATGAAGATTCAAGGTTACGTATTATTCATCGAGATCTAAAAGCAAGTAATATTCTTTTAGATGAAGAGTTAAATCCCAAAATATCAGATTTTGGTATGGCAAGACTATTTGTTGTTGACCAAACTCAAAGCAATACCAGCAGAATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCTATCAAATCAGATGTTTTCAGTTTTGGCATATTGGTTCTAGAGATTGTAAGTGGCAAAAAGAACAACAGTGTCTTTGATGAAGAGAACGCCCATGATCTATTAAGCTATGCATGGAAAAATTGGAGAGAAGGCATGGCTTTCAATTTAGCGGATCCTATGTTAAAAAATTGTTCAAGAAATGAAATAATGAGATGCATCCATATTGGGTTATTATGTGTGCAAGAAAATGTGGCTGATAGGCCAACCATGGCTTCAGTTGTAGTTATGCTGAATAGCTACTCTTCCTCTCTTCCCTTTCCTTCAAAGCCTCCACTTTTAATAAACACCAGAGGTTCATCAGAGATACATTTAAGGGAGTACAGTTCAGAAGCAACAAGATCAAGCGAAGGAGGAAGTAACTCTATGCAACAATCAGTAAATGAAGCATCAATTACTGAACCATATCCACGTTAG 2004 0.3982 MTTIISIALLSFFSHFIVLTTAQQDFIYHLCYNDVGNYTSTSSYDTNLKTLLSNLTSDPKVDYGYYTSSEGQNPNRVNALGLCRADVKPDSCRTCLNNATILLRKLCPNQKEAYGYNDGCILRYANRSMFGINQDSDFSIFMCNPSNATDNYNEVLDGLMRRLRGKATAGDSRRKFAAGTVAALFQTVYGFAQCMPDLAEQDCDDCLEKAISSIPRLCNNRIGGRIIKLSCNVRYENYRFYDDVVLDSLSSSPPAASPSNTSSSQGNGHSTSRTVIIVAVSIGAFVAILILICIYFVVRRSKKPIETDQPEAEHDEIKPIESLQFNFNTIKLATDNFSIANKLGQGGFGSVYKGKLPNGQDIAVKRLSMDSGQGDSEFKNEVLLVAKLQHRNLVRLLGFSLEKKERLLAYEFLPNRSLDYLLFDSNQRVHLNWIIRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVVDQTQSNTSRIVGTYGYMAPEYAMHGQFSIKSDVFSFGILVLEIVSGKKNNSVFDEENAHDLLSYAWKNWREGMAFNLADPMLKNCSRNEIMRCIHIGLLCVQENVADRPTMASVVVMLNSYSSSLPFPSKPPLLINTRGSSEIHLREYSSEATRSSEGGSNSMQQSVNEASITEPYPR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4201g00030 667 MobiDBLite consensus disorder prediction 636 667 - -
Pral4201g00030 667 FunFam Cysteine-rich receptor-like protein kinase 10 299 412 - -
Pral4201g00030 667 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Pral4201g00030 667 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Pral4201g00030 667 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 665 - -
Pral4201g00030 667 SMART serkin_6 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00030 667 MobiDBLite consensus disorder prediction 641 661 - -
Pral4201g00030 667 Pfam Protein kinase domain 339 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00030 667 Gene3D Transferase(Phosphotransferase) domain 1 413 615 - -
Pral4201g00030 667 SUPERFAMILY Protein kinase-like (PK-like) 322 632 IPR011009 -
Pral4201g00030 667 ProSiteProfiles Gnk2-homologous domain profile. 134 240 IPR002902 -
Pral4201g00030 667 Gene3D Phosphorylase Kinase; domain 1 299 412 - -
Pral4201g00030 667 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pral4201g00030 667 Gene3D - 22 129 IPR038408 -
Pral4201g00030 667 Gene3D - 135 240 IPR038408 -
Pral4201g00030 667 FunFam cysteine-rich receptor-like protein kinase 10 413 614 - -
Pral4201g00030 667 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pral4201g00030 667 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Pral4201g00030 667 CDD STKc_IRAK 343 608 - -
Pral4201g00030 667 FunFam Cysteine-rich receptor-like protein kinase 10 139 240 - -
Pral4201g00030 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pral4201g00030 667 ProSiteProfiles Protein kinase domain profile. 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4201g00030 Pral-Chr4201 459568 464121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4201g00030 7 667 Receptor kinase-like Gene Family AT4G21410 47.118 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4201g00030 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4201g00030 - - qsa:O6P43_031179 783.097