Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4201g00029 ATGACAACCATTATTTCAATCGCTTTGCTTTCTTTCTTTTCTCATTTCATCGTTCTCACTACAGCCCAGCAAGACTTCATATACCATTTGTGTTACAACGATGTTGGTAACTACACAAGCACGAGTTCCTACGACACAAACCTTAAAACCCTTCTTTCTAATCTCACTTCGGACCCAAAAGTTGATTATGGCTATTACACTTCCTCTGAAGGCCAAAATCCTAATAGGGTCAACGCTCTTGGACTGTGCAGAGCAGATGTTAAGCCAGATTCTTGTCGTACTTGCCTCAACAATGCCACAATCCTTCTACGAAAGCTATGTCCAAATCAAAAGGAAGCATATGGATACAACGATGGGTGCATTTTACGATACGCTAATCGCTCCATGTTTGGGATAAACCAAGACTCAGATTTTTCAATCTTCATGTGCAACCCTAGTAATGCAACAGACAACTACAATGAAGTGCTTGATGGTCTGATGCGAAGGCTGAGAGGCAAAGCCACCGCCGGCGACAGTCGCAGGAAGTTTGCTGCCGGTACGGTGGCGGCTTTGTTTCAAACTGTATATGGTTTTGCTCAGTGCATGCCTGATTTGGCTGAGCAAGATTGTGATGACTGCTTGGAGAAGGCAATCTCGAGCATTCCCAGATTGTGTAACAACAGGATCGGTGGACGGATAATCAAACTGAGTTGCAACGTTAGATATGAGAATTATCGCTTCTATGATGATGTGGTTCTTGATTCATTATCTTCATCTCCTCCGGCTGCTTCACCATCCAACACATCTTCCTCACAAGGAAATGGCAACAGTACATCAAGAACAGTCATAATCGTGGCTGTGTCTATTGGTGCTTTTATCGCGATTCTTGTATTGATCTGCATCTATTTTATGGTTCGGAGATCGAAGAAAACAATTGAAACTGATCAACCTGAAGCAAAGGATGATGATGATGAAATTAAACCAATTGAGTCACTGCAATTTAATTTCAACACCATAAGACTCGCCACAGATAACTTCTCTATTGCCAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATATAAGGGCAAGCTTCCAAATGGGCAAGACATTGCTGTTAAAAGGTTGTCCATGGATTCCGGCCAAGGAGATTTAGAATTTAAAAATGAAGTGCTTTTGGTGGCTAAACTCCAACATCGCAATTTAGTGAGATTATTGGGCTTCTCCTTGGAAAAGAAAGAAAGGCTATTGGTATATGAGTTTCTTCCCAATAGAAGCCTTGATTACTTATTGTTTGATACGAATGAGAGTGTTCATTTGAATTGGGTTATGCGCCACAAAATCATAGGAGGCATTGCTCGTGGCCTTCTTTACCTTCATGAAGATTCAAGATTACGTATTATTCATCGAGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTAAATCCCAAAATATCAGATTTTGGTATGGCAAGACTATTTGTTGTTGACCAAACTCAAAGCAATACCAGCAGAATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCCATCAAATCAGATGTTTTCAGTTTTGGCATATTGGTTCTAGAGATTGTAAGTGGCAAAAAGAACAACAGTGTCTTTGATGAAGAGAACGCCCATGATCTATTAAGCTATGCATGGAAAAATTGGAGAGACGGGACGGCTTTCAATTTAGCAGATCCTATATTAAACAATGGTTCAAGAAATGAAATAATGAGATGCATCCATATTGGGTTATTATGTGTTCAAGAAAATGTGGCTGATAGGCCAACCATGGCTTCAGTTGTAGTTATGCTGAATAGCTACTCTTCCTCTCTTCCCTTTCCTTCAAAGCCTCCACTTTTAATAAACACCAGAGGTTCATCAGAGATACATTTAAGGGAGTACAGTTCAGAAGCAACAAGATCAAATGAAGGAGGAAATAACTCTATTCAACAATCAGTAAATGAAGCATCAATTACTGAACTATATCCACGTTAG 2010 0.3985 MTTIISIALLSFFSHFIVLTTAQQDFIYHLCYNDVGNYTSTSSYDTNLKTLLSNLTSDPKVDYGYYTSSEGQNPNRVNALGLCRADVKPDSCRTCLNNATILLRKLCPNQKEAYGYNDGCILRYANRSMFGINQDSDFSIFMCNPSNATDNYNEVLDGLMRRLRGKATAGDSRRKFAAGTVAALFQTVYGFAQCMPDLAEQDCDDCLEKAISSIPRLCNNRIGGRIIKLSCNVRYENYRFYDDVVLDSLSSSPPAASPSNTSSSQGNGNSTSRTVIIVAVSIGAFIAILVLICIYFMVRRSKKTIETDQPEAKDDDDEIKPIESLQFNFNTIRLATDNFSIANKLGQGGFGSVYKGKLPNGQDIAVKRLSMDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSLEKKERLLVYEFLPNRSLDYLLFDTNESVHLNWVMRHKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVVDQTQSNTSRIVGTYGYMAPEYAMHGQFSIKSDVFSFGILVLEIVSGKKNNSVFDEENAHDLLSYAWKNWRDGTAFNLADPILNNGSRNEIMRCIHIGLLCVQENVADRPTMASVVVMLNSYSSSLPFPSKPPLLINTRGSSEIHLREYSSEATRSNEGGNNSIQQSVNEASITELYPR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4201g00029 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Pral4201g00029 669 SUPERFAMILY Protein kinase-like (PK-like) 324 633 IPR011009 -
Pral4201g00029 669 FunFam Cysteine-rich receptor-like protein kinase 10 299 414 - -
Pral4201g00029 669 MobiDBLite consensus disorder prediction 643 663 - -
Pral4201g00029 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pral4201g00029 669 Gene3D - 22 129 IPR038408 -
Pral4201g00029 669 Gene3D - 135 240 IPR038408 -
Pral4201g00029 669 SMART serkin_6 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00029 669 CDD STKc_IRAK 345 610 - -
Pral4201g00029 669 FunFam cysteine-rich receptor-like protein kinase 10 415 616 - -
Pral4201g00029 669 ProSiteProfiles Gnk2-homologous domain profile. 134 240 IPR002902 -
Pral4201g00029 669 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pral4201g00029 669 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Pral4201g00029 669 Pfam Protein tyrosine and serine/threonine kinase 341 607 IPR001245 GO:0004672|GO:0006468
Pral4201g00029 669 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Pral4201g00029 669 MobiDBLite consensus disorder prediction 641 669 - -
Pral4201g00029 669 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pral4201g00029 669 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Pral4201g00029 669 ProSiteProfiles Protein kinase domain profile. 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00029 669 FunFam Cysteine-rich receptor-like protein kinase 10 139 240 - -
Pral4201g00029 669 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 668 - -
Pral4201g00029 669 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4201g00029 Pral-Chr4201 459568 490896 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4201g00029 7 669 Receptor kinase-like Gene Family AT4G21410 47.178 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4201g00029 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4201g00029 - - qsa:O6P43_031179 790.415