Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4201g00020 ATGACAACCATCATTTCGATCGCTTTGCTTTCTTTCTTTTCTCATTTCATCATTCTCACTACTGCACAGCAAAACTTTCTACGTCATTTGTGTTTCAGTAATGCTGGTAACTACACAAGCAGAAGTTCCTACGACGCAAACCTTAAAACCCTTCTTTCTAATCTCACTTCCGACCCAAAAGTTGATCATGGCTATTACGCTTCCTCTGAAGGCCAAAATCCTAACAGGGTCAACGCTCTTGGGCTGTGCAGAGCAGATGTTAAGCCAGATTCTTGTCTTAGTTGCCTCCACAATGCCACAATCCTTCTACGAAAGCTATGTCCAAATCAAAAGGAAGCATATGGATACAACGATGGGTGCATTTCACGATACGCTAATCGCTCCATGTTTGGGGTAAACCAAGACTCAAATTTTTCATTTGATATGTGTAACCCTAGTAATGCAACAGACAGCTACAATGAAGTGCTTGATGGTCTGATGCGAAGGCTGAGAGGCAAAGCCGCCGCTGGCGACAGCCGCAGGAAGTTTGCTGCCGGTACGGCGGCGGTGGCGGCTTCTTTCTTTCAAACTGTATATGGTTTTGCTCAGTGCATGCCTGATTTGCCTAAGCAAGATTGTGATGACTGCTTGGAGAAGGCAATCTCGAGCATTCCCATTTTTTGTAACAACAGGATCGGTGGACGGATTATCAAACCGAGTTGCAACGTTAGATATGAGAATTATCCCTTCTATGATGTTGCGGTACCTTCACCTCCTTCCGCTGCTTCACCATCCAACACATCTTCCCCCCAAGGGAGTGGCAACAGTACATCAAGAACAGTCATAATCGTGGCTATGTCTATTGGAGCTTTTGTCGCAATTCTTATTTTGATTTGCATCTATTTTCTGGTTCGGAGATCGAAGAAACCAATTGAAACCATTCAACCTGAGGTAGAGCATGATGAAATTGAACCAACCGAGTCACTGCAATTCAATTTCAACACCATAAAACTCGCCACAGGTGACTTCTCTAATGCAAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATATAAGGGCAAGCTTCCAAATGGGCAAGACATTGCTGTTAAAAGGTTGTCCATGGATTCTGGCCAAGGAGACTCAGAATTTAAAAATGAAGTGCTTTTGGTGGCTAAACTCCAACATCGCAATTTAGTGAGATTATTGGGCTTCTCCTTAGAAAAGAAAGAAAGGCTATTGGTATATGAGTTTCTTCCCAATAAAAGTCTTGATTGCTTGTTGTTTGATTCGAATCAACGTGTTCATTTGAATTGGATAATGCGTCACAGAATCATAGGAGGCATTGCTCGTGGCCTTCTTTATCTTCATGAAGATTCAAGATTACGTATTATTCATAGAGATATCAAAGCAAGTAATATTCTTTTAGATAAGGAATTAAATCCTAAAATATCAGATTTCGGCATGGCAAAACTATTTGTTGTCGACCAAACTCAAAGCAATACTAGTAGGATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATACATGGACTATTTTCCATCAAATCAGATGTTTTTAGTTTTGGCATATTAGTTCTAGAGATTTTAAGTGGCAAAAAGAAGAACAGTGTCTTTGATGAAGAGAACGCCCATGATCTATTAAGCTATGCATGGAAAAATTGGAGGGAAGGGACGACTTTCAATTTAGTAGATCCTCTATTAAATAATGTTTCAAGGAATGAAATAATGAGATGCATCCATATTGGGTTATTATGTGTTCAAGAAACTATAGCTGACAGGCCAACCATGGCTTCGGTTGTAGTTATGCTGAATAGCTACTCTTCCTCTCTCCCTTTTCCTTCAAAGCCTCCACTTTTAGTGAGTACCAGTGGCTCATCAGAGACACATTTGAGGGAGTATAACTCAGAGGCAACAAGATCAAGTGAAGGGGAAAGTAACTCTATCCAACAATCAATAAATGAAGCATCAATTACTGAACTATATCCCCGTTAG 2001 0.4063 MTTIISIALLSFFSHFIILTTAQQNFLRHLCFSNAGNYTSRSSYDANLKTLLSNLTSDPKVDHGYYASSEGQNPNRVNALGLCRADVKPDSCLSCLHNATILLRKLCPNQKEAYGYNDGCISRYANRSMFGVNQDSNFSFDMCNPSNATDSYNEVLDGLMRRLRGKAAAGDSRRKFAAGTAAVAASFFQTVYGFAQCMPDLPKQDCDDCLEKAISSIPIFCNNRIGGRIIKPSCNVRYENYPFYDVAVPSPPSAASPSNTSSPQGSGNSTSRTVIIVAMSIGAFVAILILICIYFLVRRSKKPIETIQPEVEHDEIEPTESLQFNFNTIKLATGDFSNANKLGQGGFGSVYKGKLPNGQDIAVKRLSMDSGQGDSEFKNEVLLVAKLQHRNLVRLLGFSLEKKERLLVYEFLPNKSLDCLLFDSNQRVHLNWIMRHRIIGGIARGLLYLHEDSRLRIIHRDIKASNILLDKELNPKISDFGMAKLFVVDQTQSNTSRIVGTYGYMAPEYAIHGLFSIKSDVFSFGILVLEILSGKKKNSVFDEENAHDLLSYAWKNWREGTTFNLVDPLLNNVSRNEIMRCIHIGLLCVQETIADRPTMASVVVMLNSYSSSLPFPSKPPLLVSTSGSSETHLREYNSEATRSSEGESNSIQQSINEASITELYPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4201g00020 666 ProSiteProfiles Gnk2-homologous domain profile. 134 243 IPR002902 -
Pral4201g00020 666 SUPERFAMILY Protein kinase-like (PK-like) 321 633 IPR011009 -
Pral4201g00020 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pral4201g00020 666 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pral4201g00020 666 SMART serkin_6 336 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00020 666 CDD STKc_IRAK 342 607 - -
Pral4201g00020 666 ProSiteProfiles Protein kinase domain profile. 336 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00020 666 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Pral4201g00020 666 Gene3D Transferase(Phosphotransferase) domain 1 412 614 - -
Pral4201g00020 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Pral4201g00020 666 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 665 - -
Pral4201g00020 666 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pral4201g00020 666 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Pral4201g00020 666 Pfam Protein kinase domain 337 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4201g00020 666 Gene3D - 23 129 IPR038408 -
Pral4201g00020 666 Gene3D - 135 243 IPR038408 -
Pral4201g00020 666 MobiDBLite consensus disorder prediction 642 660 - -
Pral4201g00020 666 Gene3D Phosphorylase Kinase; domain 1 299 411 - -
Pral4201g00020 666 MobiDBLite consensus disorder prediction 624 666 - -
Pral4201g00020 666 FunFam Cysteine-rich receptor-like protein kinase 10 298 411 - -
Pral4201g00020 666 FunFam cysteine-rich receptor-like protein kinase 10 412 613 - -
Pral4201g00020 666 FunFam Cysteine-rich receptor-like protein kinase 10 137 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4201g00020 Pral-Chr4201 369030 373452 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4201g00020 36 666 Receptor kinase-like Gene Family AT4G21410 47.201 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4201g00020 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4201g00020 - - qsa:O6P43_031179 769.229