Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4201g00011 ATGGAAAGTGATGCCCAAGAGACCTTTAACTCATCTTCGTCATCATCATTATCTTCTTCTTCTTCATCATCATCATCAAACTCAGATTCAGGTGCCAAGAGAGATTCAAAAGTTGTTTCAGATCAGGATGGCAATTATTGCTGCAACAACAAGAAGAAGATCGGAAGTGAAGAGAAGGATGATAATAATAATGATAATAACAACAATAAGCATCCATCTTACAGAGGTGTGAGGATGAGGAACTGGGGAAAATGGGTTTCAGAGATTCGTGAGCCCAGAAAGAAATCCAGAATATGGCTTGGAACTTACCCTACTGCAGAAATGGCGGCTCGAGCCCACGACGTCGCGGCTTTAGCCATTAAAGGTCATTCAGCTTACCTCAATTTCCCTCACTTGGCTCTGGAGCTGCCCCGGCCGGCCACCACAGCTCCGAAGGACATCCAAGCCGCGGCTGCAAAGGCGGCTTCTACTGTCTTTGAGGTGGCTACTAATAAGCATTGTCGAGTTGAGGAAGCCCAAGCCGAAGCCGAGCCGGCCTCGTCTTCGACTCAAGAACAGAATTCTTCTTCTCCTCCAATATCGTCTAAGGAAGAAGATGCTTTGTTTGACCTACCAGATCTTTTCACAGATGGCAACAATGGCCTTTGTTCTTATTCTTCTGCTTCTTCTTCTTCTTCCTCTTGGAATTTTTGTGCATCTGATAGTGGTTTCAGGCTTGAGGAGCCATTGCTTTGGGAAAATTACTAG 747 0.4538 MESDAQETFNSSSSSSLSSSSSSSSSNSDSGAKRDSKVVSDQDGNYCCNNKKKIGSEEKDDNNNDNNNNKHPSYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPHLALELPRPATTAPKDIQAAAAKAASTVFEVATNKHCRVEEAQAEAEPASSSTQEQNSSSPPISSKEEDALFDLPDLFTDGNNGLCSYSSASSSSSSWNFCASDSGFRLEEPLLWENY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4201g00011 248 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Pral4201g00011 248 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Pral4201g00011 248 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Pral4201g00011 248 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Pral4201g00011 248 MobiDBLite consensus disorder prediction 171 196 - -
Pral4201g00011 248 CDD AP2 72 132 IPR001471 GO:0003700|GO:0006355
Pral4201g00011 248 Pfam AP2 domain 72 123 IPR001471 GO:0003700|GO:0006355
Pral4201g00011 248 MobiDBLite consensus disorder prediction 176 195 - -
Pral4201g00011 248 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Pral4201g00011 248 MobiDBLite consensus disorder prediction 1 33 - -
Pral4201g00011 248 MobiDBLite consensus disorder prediction 1 75 - -
Pral4201g00011 248 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Pral4201g00011 248 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Pral4201g00011 248 MobiDBLite consensus disorder prediction 52 66 - -
Pral4201g00011 248 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 59 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4201g00011 Pral-Chr4201 220672 221484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4201g00011 66 244 AP2-EREBP Transcription Factor Family AT2G44940 54.327 2.59e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4201g00011 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4201g00011 - - gmx:100801129 236.498