Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4201g00002 ATGTTGGATTATGAATGGGGAAATCCGTCCACTATAATGCTCGCCGGAAACGACGAAGCCGCAGCTGCCGCAGCTGACGCGCATTCAGAGCAAACGCACCGGCAAATCTTCGACCACTATAATTCTCACCCTTTCTTGCCCGACCACCTTATTTCTCAAGCTCCACAGGGACCCACACCGACCACCACCTCTGATTTCTCCCTTGTACACCACCATCAACAATTCCATCCATCCCAACCCCATCACCATATCCACCACCAGCATTCTCTCTTCGACACACGCGCCTTCCCTGTCGCGTCGTCGTCGCATTTTCCTCCGCCAGAGCCACTGCCGCTGCCGCCGGCTCAGCCACCTCATTCCATGTTCTCCCTTGACCCGCTCCCTCCGGTCAACGCCGGCAACTGCGGGCCTGGTGGTGGGCTGCTGGTGGTGCCCAAGTCCGAAGATGTGGGTAGGTCCATGGACTTCTCGGCGTCTCGAATTGGACTCAACCTCGGCGGCCGAACGTACTTCTCCAGCACCGAGGACGACTTTGTTAGCCGGCTCTATCGCCGGCCCAGACCGTTGGAACCCGGCTCGACGATGTCGTTGAACAACAACTCGCCGAGATGTCAAGCCGAGGGATGCAATGCCGATCTCTCCCACGCCAAGCACTATCACCGCCGACATAAGGTGTGCGAGTTTCACTCCAAAGCTGCCACCGTCATCGCCGCCGGGTTGACCCAGCGATTCTGCCAGCAATGTAGCAGGTTCCATCTCCTTTCGGAGTTCGATAACGGAAAACGAAGTTGCAGGAAAAGATTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAACCACCACCACCTCAAGATCAAACCCAGAAATCTCACCTCGAAAAGCATCGCAATTCTTCTTCTACTTTGAACATTGTAGCAAAAGAGTCCCCGCCGGATTCTGGAATTCAGTCATCTTCATCGGTGACGGTGGCGGTGTCACCGCCGGATTATTTCCAGCAAAAACCGTATCAAAACACAACATCATCAAGGACACTGTTTTTCTCAAGTGGTTAG 1053 0.5442 MLDYEWGNPSTIMLAGNDEAAAAAADAHSEQTHRQIFDHYNSHPFLPDHLISQAPQGPTPTTTSDFSLVHHHQQFHPSQPHHHIHHQHSLFDTRAFPVASSSHFPPPEPLPLPPAQPPHSMFSLDPLPPVNAGNCGPGGGLLVVPKSEDVGRSMDFSASRIGLNLGGRTYFSSTEDDFVSRLYRRPRPLEPGSTMSLNNNSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQPPPPQDQTQKSHLEKHRNSSSTLNIVAKESPPDSGIQSSSSVTVAVSPPDYFQQKPYQNTTSSRTLFFSSG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4201g00002 350 MobiDBLite consensus disorder prediction 270 350 - -
Pral4201g00002 350 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 188 342 IPR044817 GO:0003677
Pral4201g00002 350 MobiDBLite consensus disorder prediction 297 350 - -
Pral4201g00002 350 ProSiteProfiles Zinc finger SBP-type profile. 201 278 IPR004333 GO:0003677
Pral4201g00002 350 Gene3D - 196 265 IPR036893 GO:0003677|GO:0005634
Pral4201g00002 350 FunFam Squamosa promoter-binding-like protein 14 195 265 - -
Pral4201g00002 350 Pfam SBP domain 204 277 IPR004333 GO:0003677
Pral4201g00002 350 SUPERFAMILY SBT domain 202 281 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4201g00002 Pral-Chr4201 18045 20751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4201g00002 1 251 SBP-box Gene Family AT1G02065 46.094 4.16e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral4201g00002 SBP 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4201g00002 - - gmx:100802206 411.764