Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4197g00013 ATGGCAAAGGCAAAAGAATTAAAGGAAGTTGAGCTTGATGTGAAGCAAGTAGGAGGACCAATTCTGGTTGCACCGGCAGAAGAAACAGAGAAAGGGCTTTACTTCCTTTCAAACCTTGACCAGAACGTAGCAGTTATGATTCGTACAGTTTATTGTTTCAAATCTGCAGGTTCAAGGGGCAACGAGGATGCTGCAACAGTAATCAGACAAGCGTTGTCCAAGATTCTTGTCCCTTATTACCCCATGGCTGGCAGGTTAACTGTAAGTTCTGAAGGGAAGTTGATAGTTAATTGTACTGGTGAAGGTGTAATGTTCGTTGAGGCTGAAGAAACAAGCTGTGATGAGATTGAGGAAATTGGAGATTTGATCACAAACCCTAATCCTTCAACTCTTGGGAAACTAGTTTATAACGTTCCTGGTGCCAACAACATACTTGAGATGCCTCTTATGACTGTTCAGGTTACAAAATTCAAATGTGGAGGACTTACTTTGGGGCTGGCCATTAACCACTGTATGCAAGATGGACTGTGTGCTATGGAATTCGTAAACTCATGGAGTGAAATTGCAAGAGGCTTGGACTTAAAGATTCCTCCTTTTCTTGATCGCACCATTCTCGAAGCACGCGAGCCTCCTCTTATAGAGTTCCCTCACCATGAATTTGCAGAGATACAAGACGTATCATCAGATACCACGAAGCTGGACGAGAAGAAAGAAGAAGAAGAAGACATATTGCTCTACAAGTCCTTCTGTTTCGACCCACAGAAACAAGAACTTCTCAAGAAAATGGCCATGCAAGATGGGGTTCTTCAAAAGTGCTCTACTTTTGAAGCCCTTTCTGGTTTTGTATGGAGAGCTCGTACTGAAGCCTTGAAGATGAAACCTAATCAACAAACCAAGCTTCTCTTTGCTGTTAATGGACGGTCAAGATTCGTTCCTCCATTACCAGAAGGCTACTTTGGAAACGCCATACTATTCACACATTCACTGTGTGAGGCTGGTGAGTTGCTGAAGAATCCTCTATCATTCGCAGTTGGGTTGGTTCAGAAGGCCATTGATTTGGTTTCAGATAGGTATTTGAGATCAGCTATAGATTACTTTGAGACGACAAGAGCGAGGCCTTCCTTAACAGCCACGCTTTTGATTACAACTTGGACTAGGTTGTCTTTCCAGACCACAGATTTTGGATGGGGACAGCCTCTGTGTTCTGGGCCTGTCACCTTGCCTGAGAAAGAGGTTGCCTTGTTCCTCTCTCATGGGGGAGAGAGGAAGAACATAAATGTTCTTCTGGGTTTGCGTGCTTCTGCCATGGAAGAGTTTGAAGCCCTGATGAGGCAGTTATGA 1341 0.4385 MAKAKELKEVELDVKQVGGPILVAPAEETEKGLYFLSNLDQNVAVMIRTVYCFKSAGSRGNEDAATVIRQALSKILVPYYPMAGRLTVSSEGKLIVNCTGEGVMFVEAEETSCDEIEEIGDLITNPNPSTLGKLVYNVPGANNILEMPLMTVQVTKFKCGGLTLGLAINHCMQDGLCAMEFVNSWSEIARGLDLKIPPFLDRTILEAREPPLIEFPHHEFAEIQDVSSDTTKLDEKKEEEEDILLYKSFCFDPQKQELLKKMAMQDGVLQKCSTFEALSGFVWRARTEALKMKPNQQTKLLFAVNGRSRFVPPLPEGYFGNAILFTHSLCEAGELLKNPLSFAVGLVQKAIDLVSDRYLRSAIDYFETTRARPSLTATLLITTWTRLSFQTTDFGWGQPLCSGPVTLPEKEVALFLSHGGERKNINVLLGLRASAMEEFEALMRQL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4197g00013 446 Gene3D - 16 221 IPR023213 -
Pral4197g00013 446 FunFam Tryptamine hydroxycinnamoyl transferase 230 444 - -
Pral4197g00013 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 440 - -
Pral4197g00013 446 Gene3D - 222 445 IPR023213 -
Pral4197g00013 446 Pfam Transferase family 22 443 - -
Pral4197g00013 446 FunFam Spermidine hydroxycinnamoyl transferase 13 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4197g00013 Pral-Chr4197 122061 124662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4197g00013 22 446 Monolignol Biosynthesis Gene Families AT5G48930 37.071 4.97e-91 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4197g00013 K15400 - gmx:100794490 650.588