Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4197g00012 ATGGCAAAGGCAAAAGAATTAAAGGAGGCTGAGCTTGATGTGAAGCAAGTAGGAGGACCAGTTCTGGTTGGACCAGCAGAGGAAACAGAGAGAGGGCTTTACTTCCTTTCAAACCTTGACCAGAACGTAGCAGTTATGGTTCGTACAGTTTATTGTTTCAAATCTGCAGGTTCAAGAGGGAACGAGGATGCTGCAACAGTAATCAGACAAGCATTGTCCAAGATTCTTGTCCCTTATTACCCCATGGCTGGCAGGTTAACTTTAAGTTCTGAAGGGAAGTTGATAGTTGATTGCACTGGTGAAGGTGTGATGTTCGTTGAGGCTGAAGAAACAAACTGTGATGAGATTGAGGAAAATGGAGATTTGATCACAAACCCTAATCCTTCAACTCTTGGGAAACTGGTTTATAGTGTTCCTGGTGCCAACAACATACTTGAGATGCCTCTTATGACTGTTCAGGTTTCACTTTGA 471 0.431 MAKAKELKEAELDVKQVGGPVLVGPAEETERGLYFLSNLDQNVAVMVRTVYCFKSAGSRGNEDAATVIRQALSKILVPYYPMAGRLTLSSEGKLIVDCTGEGVMFVEAEETNCDEIEENGDLITNPNPSTLGKLVYSVPGANNILEMPLMTVQVSL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4197g00012 156 Gene3D - 16 156 IPR023213 -
Pral4197g00012 156 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 154 - -
Pral4197g00012 156 Pfam Transferase family 22 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4197g00012 Pral-Chr4197 118234 118704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4197g00012 22 156 Monolignol Biosynthesis Gene Families AT5G48930 35.294 1.69e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4197g00012 K15400 - gmx:100794490 200.29