Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4197g00011 ATGAAACTCTCTTTCTCTGTGCAATCGAAATCCAACACCAAGTCAAACCCCATCAGGTCCTCCAACAAATTCGACGCCGCCGCTTCCGATACCAAAGATGGAAAGTCCAACGCCAGAGAGTATGTTACAGAGTTCGATGCATCGAAATCCCCTTCTGATCCTAACAAAGCCACCACGGTTATTCCCCCCATTGAGAACGAGTGGAATTTAGGGAGGTCCTACAAGAGAATGAAGAATCTAGACTTACCCATCACTGAATCTAATGTAACCGAGTTGGGATTTGAGCTGGATACGTCGACGGTTGTGGAACCCGGTTCGGACATGTCTTATGGTCTGAATCTTCGGCAGACAAAGAAGAATGATGGGGACGGGGAGAAACCTGCTGCTGGGAGTGGGGGTGATGATAGTGATAATAACGGTAGGTCGCGGCCTGTTTCTCTGGACTCTGTGGTGCTGCAGAAGTTTAAGGATGATATGGAGAGGTTACCGGACCACAGAGGTTTTGAGGAGTTCAAAGATGTCGCTGTTGAGGGTTTTGGTGCAGCTTTGCTAGCTGGGTATGGATGGCGTGAAGGGATGGGCATTGGAAAGAATGCCAAGGAGGATGTGAAAGTTGTACAGTATGAGAGGAGGACTGCCAAAGAAGGGTTGGGTTTTGTTAGTGATCATGCTCGTAAGCGGAATTCGAAGGAGGAAGTGAAGATACCTAAGGAGCATGGCAGAGAGGGTTCATTAGTGGGGAAGGTTGTTAGAATAGTTGAGGGCAAAAATGCAGGTCTGAAGGGTAAAATTGTACGAGAGGTTGAAGATAAATGGGTTGTTTTAAAACTTGTGAAAAGTGAAGAGGAAGTGAAAGTGGGCCCTCAAGATTTTGTAGAACTGGGCTCTATTGAAGAAGAGAGGTTTTTGAAGAAATTGAAGGAATTAAAGATTCAGGATACTCATAAAGATAGAGATTCAAGGAATAAACGCAATAGGGAGGAGGGAAGGAGAGGCCGTGATGAGGTTGTAGTTGACGTTAAGAGAGATAGTAGGAAGGAAGAGCAGGGGAAAAAACGAGTTTCATGGCTTACTAGTCATATACGGGTCAGGGTTATTAGCAAAGATTTCAAAGGAGGGCGGTTATATTTGAAGAAGGGACAGGTATTGGACGTTGTTGGGCCTACTACTTGCGATATATCTATAGATGATAGCAAGGAGATCATCCAGGGGATTTCCCAAGACCTTCTTGAGACTGCTATCCCTCGTCGAGGGGGCCCAGTTCTGGTATTATATGGTAAACATAAAGGCATTTATGGCAGTCTAGTTGAGAGGGATTTGGACAAAGAAATGGCTGTTGTTAGAGATGCTGACACCCATGCACTGGTCAATGTGCGGCTTGAACAAATTGCAGAGTTTATAGGGGATCCAAGTATCTTGGGATACTGA 1428 0.4545 MKLSFSVQSKSNTKSNPIRSSNKFDAAASDTKDGKSNAREYVTEFDASKSPSDPNKATTVIPPIENEWNLGRSYKRMKNLDLPITESNVTELGFELDTSTVVEPGSDMSYGLNLRQTKKNDGDGEKPAAGSGGDDSDNNGRSRPVSLDSVVLQKFKDDMERLPDHRGFEEFKDVAVEGFGAALLAGYGWREGMGIGKNAKEDVKVVQYERRTAKEGLGFVSDHARKRNSKEEVKIPKEHGREGSLVGKVVRIVEGKNAGLKGKIVREVEDKWVVLKLVKSEEEVKVGPQDFVELGSIEEERFLKKLKELKIQDTHKDRDSRNKRNREEGRRGRDEVVVDVKRDSRKEEQGKKRVSWLTSHIRVRVISKDFKGGRLYLKKGQVLDVVGPTTCDISIDDSKEIIQGISQDLLETAIPRRGGPVLVLYGKHKGIYGSLVERDLDKEMAVVRDADTHALVNVRLEQIAEFIGDPSILGY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4197g00011 475 MobiDBLite consensus disorder prediction 1 64 - -
Pral4197g00011 475 PANTHER G PATCH AND KOW-CONTAINING 1 471 IPR045166 GO:0000398
Pral4197g00011 475 SMART kow_9 414 441 IPR005824 -
Pral4197g00011 475 SMART kow_9 243 270 IPR005824 -
Pral4197g00011 475 Gene3D - 360 414 - -
Pral4197g00011 475 MobiDBLite consensus disorder prediction 313 335 - -
Pral4197g00011 475 ProSiteProfiles G-patch domain profile. 176 222 IPR000467 GO:0003676
Pral4197g00011 475 MobiDBLite consensus disorder prediction 26 42 - -
Pral4197g00011 475 MobiDBLite consensus disorder prediction 1 25 - -
Pral4197g00011 475 Pfam G-patch domain 163 221 IPR026822 -
Pral4197g00011 475 SMART G-patch_5 174 220 IPR000467 GO:0003676
Pral4197g00011 475 MobiDBLite consensus disorder prediction 105 148 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4197g00011 356 448 C2H2 Transcription Factor Family AT1G55460 33.333 7.42e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4197g00011 K13101 - qsa:O6P43_026128 540.036