Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4193g00072 ATGGATCTTCTTCTGGGTCTTCTTCTTCTGGCCTTTGTCTTTCTCTTCACCGCCCATTGCTCAGAAGATATTGCTACTTCTGTCCCTAGTGACGCATTGTCCCTTCTCAGCTTCAAGGACTCCGTCTCTTCCGAATCTTCTGCCCTTCTCGCTGGATGGAGTAAGGAGTCTCCTGAAAGTTACTGTCAATGGCACGGCGTCACCTGCGAGGATAGGCTCTCTGGCAGAGTTATTGCTTTGAACTTGACCGGACTTCGCGGCGGCAAGCTCACTCCTTCCATTGGAGATATGTCTGGGCTTCGAGTTTTGTCCCTTCCCCAAAACACGTTCTCCGGTGAGATCCCGGAGACCCTGGGGAAGCTTCGGCTTCTGGAGGTTCTTGAGCTTCAAGAAAACAATTTTTCCGGAGGGATCCCCAACCAGATAAGCTATCTTCCATCTCTTCGCATTCTTAACCTCTCTAATAATGCTTTGTCCGGCTCCATGCCTGGTAAATTGATTGGCTTTGGAAATGTTAGCGTCATGGACTTGTCGAGCAATCAGCTTTCTGGTCCAATTGTAGATAGCGTCAATAATGTCTTCGAATTTTTGAATCATTTGAAGCTGTCCGACAACTTCCTCACGGGCCAAATTCCGTCCGAAATTGGGAAATTCAGAAATCTGAGGACGCTTTTACTCGATGGGAATATCTTAGAAGGCGCTATCCCTTCTGAGATTGGGTATATGACGGAACTCAGACTTCTAGATGTCTCTAGAAATAGTCTCACTGGAAGAATTCCAAAAGAAATAGCCAACTGCCGGAAACTGTCAGTGCTTGTGTTGACTGATTTAGTCAATGATACTCCTTCTCCGGATGAGAGCTCGGTGAATAGCTTCAGAGGAGAATTCAATGCTTTTGTTGGAAATATTCCGCCGCAGGTAATGTTGCTTTCAAGTTTAGAGATTTTGTGGGCACCAAGAGCGAATCTTGGTGGACGGTTGCCTAGGGGCTGGACAGATTCATGCTCGCTGAGAGTACTCAACTTGGCAGAGAATTATATTATTGGGGGGATACCAGAAACCTTAGGGATTTGCAGAAATTTAACTTTCCTTGACCTGAGCTCTAACAATTTAGTGGGGTATCTTCCTTTAAAGCAACTTCAAGTTCCATGTATGTTGTACTTCAATGTTAGCTGGAATAATTTATCTGGCACCCTTCTAGGATTTGGGAACGAAAGCTGTGATTTAAGCAGAATCCTAGGTGATGCACAAGTTGATATTCTTGTTTGGGAATCTCTGATGGATGCTCTCCCTGGATCAGGTTCAGAAGATGCTGTCGTCATTAACCATGATTTCAGTTGGAATAACTTTACGGGATCTTTACCTTTATTCCTACTGGGAGATACTACAAGGAGCAAGATTTCCTACACGCTATCACTCAGTAATAACAAGTTCAGTGGAACTCTACCATATCATCTGGTTTTGAACTGTAATGATTTCAAGATGTTAAAGGTTAACTTGAGTGTGAACGAACTCTCTGGTGGAAATTTCCAAAAGTTGCTTATTGACTGTTTGCAGTTGACAGAGTTTGAGGCTGCGTACAACCAGATTGGGGGTTCAATTGATCCGCATATTGGTGACCATACAATGCTCCAGCGCCTTGATTTGAGGGGGAACAAACTTACTGGATTTCTGCCTGACCAATTGGGAAACCTGAAAGACATCAAATGGTTGCTTTTAGGGGGGAACAATTTAACTGGAGATATCCCTTCTCAACTTGGTCAATTGGCTTCCCTTGTTGTTTTGGATCTATCTCACAATGCTCTTACTGGCACAATTCCCGTAAGCTTGACAAATGCCACAACTCTTGAATCTCTGTTGCTAGATCACAACAAGCTCAATGGGGAAATACCTTCATCCTTTTCCACTCTTTCCAGTCTTGTTGGTTTTGATGTTTCTTTCAACAACCTTTCTGGTCATATTCCCCATCTCCTTAACCAAATTGATTGTGACTCCTTCAAAGGGAATGTACACCTGCATTCATGCCCTGATCCATATTCTGCCTTACCTGCTTATCTCCCAGTCCCTCTTGAAGTCCAAAATTGGCAGAGACGAAAAAAGTTGAAGACAATAATAATAGCTGTGGTCTCTTCAGTCTCTGTGGTCCTCTGTGTACTAGGAATAGTTTTAGTGATCACTTTTGGAAGGAACAAGTTTGGTCGGCTCAGCAGCCTTCGAAGCAGACTACTAGTGACCTTCCAAGATGTTCCCATTGAACTCAATTACGATAATGTTGTCACAGCCACAGGAAATTTCAGCCTCCAAAATCTAATTGGAACCGGTGGGTTTGGGTCTACTTACAAGGCTGAACTATCCCCTCGTTTCCTCGTTGCCATTAAGAGGTTGTCTATAGGTAAATTCCAAGGCATTCAACAGTTCGAGACAGAGATAAGAACCTTGGGAAGAATCCGACACAAAAACCTTGTCACTCTTATTGGCTACTATGTTGGAGAGGCCGAAATGTTCTTGATATACAACTACCTTTCAGGTGGGAACCTTGAAACTTTCATACACAACAATTCAGATAAAAATATGTTGTGGCCAATTATCTACAAGATAGCAATAGACGTGGCAGAGGCCATAGCTTACCTTCATTACTCCTGTGTTCCTCGCATTGTTCATCGTGACATCAAGCCCAGCAACATCTTACTTGATGATGACTGCAATGCCTACCTTTCAGATTTTGGATTGGCTAGACTCATGGAGGTATCTGAGACCCACGCCACAACTGATGTGGAAGGCACATTTGGGTATGTTGCACCTGAGTATGCCACCACTTGCAGGGTTTCTGACAAAGCAGATGTTTATAGCTTTGGCGTTGTGTTATTAGAGTTGATGTCTGGAAGGAAGTCACTAGATCCATCGTTTTCTGAATATGGAAACGGGTTCAATATTGTGCCGTGGGCTAAGTTGCTAATGACGGAAGGTCGTTCTTCTGAACTGTTTTCACCTGCTCTGTGGGAAGCAGGACCTGAGGAGAAACTGTTGGGGCTTTTGAAAGTTGCATTAATCTGCACGGTGGAGACGCTTTCCATTCGGCCATCGATGAAACAGGTTCTTGAGAGATTGAGACAACTTAAAAGTTGA 3126 0.4383 MDLLLGLLLLAFVFLFTAHCSEDIATSVPSDALSLLSFKDSVSSESSALLAGWSKESPESYCQWHGVTCEDRLSGRVIALNLTGLRGGKLTPSIGDMSGLRVLSLPQNTFSGEIPETLGKLRLLEVLELQENNFSGGIPNQISYLPSLRILNLSNNALSGSMPGKLIGFGNVSVMDLSSNQLSGPIVDSVNNVFEFLNHLKLSDNFLTGQIPSEIGKFRNLRTLLLDGNILEGAIPSEIGYMTELRLLDVSRNSLTGRIPKEIANCRKLSVLVLTDLVNDTPSPDESSVNSFRGEFNAFVGNIPPQVMLLSSLEILWAPRANLGGRLPRGWTDSCSLRVLNLAENYIIGGIPETLGICRNLTFLDLSSNNLVGYLPLKQLQVPCMLYFNVSWNNLSGTLLGFGNESCDLSRILGDAQVDILVWESLMDALPGSGSEDAVVINHDFSWNNFTGSLPLFLLGDTTRSKISYTLSLSNNKFSGTLPYHLVLNCNDFKMLKVNLSVNELSGGNFQKLLIDCLQLTEFEAAYNQIGGSIDPHIGDHTMLQRLDLRGNKLTGFLPDQLGNLKDIKWLLLGGNNLTGDIPSQLGQLASLVVLDLSHNALTGTIPVSLTNATTLESLLLDHNKLNGEIPSSFSTLSSLVGFDVSFNNLSGHIPHLLNQIDCDSFKGNVHLHSCPDPYSALPAYLPVPLEVQNWQRRKKLKTIIIAVVSSVSVVLCVLGIVLVITFGRNKFGRLSSLRSRLLVTFQDVPIELNYDNVVTATGNFSLQNLIGTGGFGSTYKAELSPRFLVAIKRLSIGKFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGEAEMFLIYNYLSGGNLETFIHNNSDKNMLWPIIYKIAIDVAEAIAYLHYSCVPRIVHRDIKPSNILLDDDCNAYLSDFGLARLMEVSETHATTDVEGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAKLLMTEGRSSELFSPALWEAGPEEKLLGLLKVALICTVETLSIRPSMKQVLERLRQLKS 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4193g00072 1041 Gene3D Ribonuclease Inhibitor 30 191 IPR032675 -
Pral4193g00072 1041 Gene3D Ribonuclease Inhibitor 192 288 IPR032675 -
Pral4193g00072 1041 CDD STKc_IRAK 771 1039 - -
Pral4193g00072 1041 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Pral4193g00072 1041 ProSiteProfiles Leucine-rich repeat profile. 360 381 IPR001611 GO:0005515
Pral4193g00072 1041 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 421 681 - -
Pral4193g00072 1041 Gene3D Ribonuclease Inhibitor 289 414 IPR032675 -
Pral4193g00072 1041 Gene3D Ribonuclease Inhibitor 438 676 IPR032675 -
Pral4193g00072 1041 ProSiteProfiles Protein kinase domain profile. 765 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4193g00072 1041 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Pral4193g00072 1041 ProSitePatterns Protein kinases ATP-binding region signature. 771 799 IPR017441 GO:0005524
Pral4193g00072 1041 Pfam Protein kinase domain 767 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4193g00072 1041 SMART serkin_6 765 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4193g00072 1041 Gene3D Transferase(Phosphotransferase) domain 1 841 1040 - -
Pral4193g00072 1041 SMART LRR_typ_2 145 168 IPR003591 -
Pral4193g00072 1041 SMART LRR_typ_2 542 564 IPR003591 -
Pral4193g00072 1041 SMART LRR_typ_2 242 266 IPR003591 -
Pral4193g00072 1041 SMART LRR_typ_2 589 613 IPR003591 -
Pral4193g00072 1041 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 296 1038 - -
Pral4193g00072 1041 SUPERFAMILY RNI-like 81 397 - -
Pral4193g00072 1041 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 191 278 - -
Pral4193g00072 1041 PRINTS Leucine-rich repeat signature 589 602 - -
Pral4193g00072 1041 PRINTS Leucine-rich repeat signature 361 374 - -
Pral4193g00072 1041 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 841 1041 - -
Pral4193g00072 1041 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 729 840 - -
Pral4193g00072 1041 FunFam Leucine-rich repeat receptor-like protein kinase 28 188 - -
Pral4193g00072 1041 SUPERFAMILY L domain-like 466 676 - -
Pral4193g00072 1041 SUPERFAMILY Protein kinase-like (PK-like) 743 1036 IPR011009 -
Pral4193g00072 1041 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
Pral4193g00072 1041 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Pral4193g00072 1041 Gene3D Phosphorylase Kinase; domain 1 729 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4193g00072 Pral-Chr4193 629665 633101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4193g00072 2 1040 Receptor kinase-like Gene Family AT3G02130 44.000 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Pral4193g00072 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4193g00072 - - gmx:100795047 1405.19