Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4193g00068 ATGGAACTATCAGATTTGCAAACCAGCTCATCCACTCATCACCACCACCACCGCCAGAAGCAGCAGGTCTCCTCCACGACGTCGTCTCAGGTTGTGGTCCCCAGTTTTGATGGCAGGCCTTCACCTTCTTCCTCCTCCTCTGCCTCTTCTTCATCATTCATGGGCTCCATCTCCATCCAAGCTGGCCTTTCTTCCTCGTCTTCCTCGGCTTCGTCTTCTTCTGTTTCCTTATCCAATAATTCTTCTTCTGTTTCTGCTTCTACTGCCTTGCCTAATTCTGCTGCTTCTGCTTCTGGTCCTAATGCGTCCGCTGCTCCTCACCTCATTGATGCTTCCTTGGCTATCGCCACCAGATCTGATGCCCATCCGCCAGCTCGGCCTGGAGGGGTTGTGGATGCCGTGAAGAAGACTCAAATTCAGCAGCACTTGTCGATTTCCACGGCGGTCACGCCGCCGGCGAACCCCCCTAAGAGGTCCACCAAGGATAGGCATACCAAGGTGGATGGACGTGGCCGGAGAATTCGAATGCCGGCGACTTGTGCGGCTAGGGTTTTTCAGTTGACGAGGGAATTGGGGCATAAGTCCGATGGGGAGACAATTGAGTGGCTGCTGCAGCAAGCGGAGCCGGCGATCATCGCCGCTACTGGCACCGGCACGATTCCGGCAAATTTCTCGACACTCAACGTGTCGCTTCGGAGTAGCGGGTCGACGATCTCGGCCCCGCCTTCGAAGTCTGCTCCTCATACGTTTCACGGCGCGTTGGCTCTCAGTGCCCATGGTCACCATCATCATCCTTATGAAGAAGCTTTTCAACACACTGCGCTCTTAGGGTTTCACCCTCACCATCACCACCAACAGCAGCAGAATCAACCTCATCTACTGACTGCCAACCAGATTGGGGAAGCGATTCCGGTAGGCGGAGGCGGCGGGGAGAGTGGCGGTGGCGACGCACCTGATAACTATTTGCGAAAACGTTTCAGAGAAGATCTGTTCAAAGAAGATAGCCAATCACAAAACGAGAGTGGAGGGAGCTCACCCAAGACATTCAAGAACAATTTGCAACAAATCCCAAAGCAACAAGAAGCAGCTGGATCTTCGGGCCTTCTTCGTCCTACGAACATACTACCCGCCGCCGCTACCATGTGGGCGGTAGCACCAGCCCCGGCGAGTGGCGCAGGCAGCACAATCTGGATGTTGCCTGTGAACGCCGGGGGTTCCGGTTCAGGTTCGTCGTCGGAGACCCAAATGTGGCAGTTTCCGACCGCACAAGCTGGTTCTGGAAACAACACCGCACAGGCGCCCCTGCAATTCATGCCTAGGTTCAATCTTCCGGGGGGCCTTGAATTTCAAGGAGGTGGAGGTAGAGGGGGTTCTCTGCAACTGGGTTCCATGATAATGCCTCATCAACATCATCAGCAGCAGCAACAACAACCATCTCAGCATCTTGGGCTGGGTATGTCTGAATCTAATCTGGGCATGTTGGCTGCTCTGAATGCCTATTCCAGAGCTGGTTTGAATATGAATTCTGAGGAAAATCATCCATTGGAGCACCAACACCATCATCAGCAGCAGCAGCAGCAAGCAACGGATAGTGGAGAGGAAGGTCCTAGTAGTTCTCAGTGA 1623 0.5404 MELSDLQTSSSTHHHHHRQKQQVSSTTSSQVVVPSFDGRPSPSSSSSASSSSFMGSISIQAGLSSSSSSASSSSVSLSNNSSSVSASTALPNSAASASGPNASAAPHLIDASLAIATRSDAHPPARPGGVVDAVKKTQIQQHLSISTAVTPPANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTISAPPSKSAPHTFHGALALSAHGHHHHPYEEAFQHTALLGFHPHHHHQQQQNQPHLLTANQIGEAIPVGGGGGESGGGDAPDNYLRKRFREDLFKEDSQSQNESGGSSPKTFKNNLQQIPKQQEAAGSSGLLRPTNILPAAATMWAVAPAPASGAGSTIWMLPVNAGGSGSGSSSETQMWQFPTAQAGSGNNTAQAPLQFMPRFNLPGGLEFQGGGGRGGSLQLGSMIMPHQHHQQQQQQPSQHLGLGMSESNLGMLAALNAYSRAGLNMNSEENHPLEHQHHHQQQQQQATDSGEEGPSSSQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4193g00068 540 MobiDBLite consensus disorder prediction 143 170 - -
Pral4193g00068 540 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 69 500 IPR005333 GO:0003700
Pral4193g00068 540 MobiDBLite consensus disorder prediction 301 321 - -
Pral4193g00068 540 MobiDBLite consensus disorder prediction 507 540 - -
Pral4193g00068 540 Pfam TCP family transcription factor 159 281 IPR017887 -
Pral4193g00068 540 MobiDBLite consensus disorder prediction 521 540 - -
Pral4193g00068 540 MobiDBLite consensus disorder prediction 1 103 - -
Pral4193g00068 540 ProSiteProfiles TCP domain profile. 160 214 IPR017887 -
Pral4193g00068 540 MobiDBLite consensus disorder prediction 22 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4193g00068 Pral-Chr4193 586270 588629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4193g00068 157 490 TCP Transcription Factor Family AT1G35560 45.833 1.89e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4193g00068 TCP 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4193g00068 - - zju:107403399 514.227