Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4193g00058 ATGATGGCCAAACACGCAAACCTCCGGCTTATTGCCTACTCACAAGAGATTGTAGATGGACAGCCAATTTTTGTTTCTTCAAATTGTTTTCCTATTAAGGCTTCAAACTTTGAACCTGCTGGCCATGCCTTCCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAAGAAGATAATGCAGATGGTGATGATGAGAAGGTGGTTGATGATAAGGAAAAGATGTATTTTGCATCATCTGATTCTTACAGCAGCAAGGGTAAAAAGAAGTCTGGTGCTGGAGACAAGCAACAAGATCACTATGCATTATTGGGTTTGGGCCATCTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTGAGGTATCATCCTGATAAACAGGCTGCTCTTCTGCTTGGTGAGGAGACTGAAGCTGCAAAACAGGCAAAGAAGGATGAAATAGATAGTCATTTTAAGGCAGTCCAGGAAGCATATGAAGTATTGATTGATCCGGTGAAGAGAAGAATATACGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCCACAAGACTTCTTCAAAGTTTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCCATTAATCAACCAGTTCCATCTTTAGGAGATGACAATACTCCACTAAAAGAAGTTGATGCATTCTACGATTTCTGGTATGCATTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAACAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCAAGGAAGGAAGAGTATGCACGGATTCGTGCTCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATAATGAGGAGAAAGGAAGAGGAAAAAGCTGAGAAGAAGAGGAAAAAAGAGGCCAAGATTCTGGCCAAAAAATTACAGGAGGAAGAAGCTGCTAGAATTGCAGAAGAGGAGAAGAGACAGAAGGAGGAGGAGGAGAGACAAGCTGCAGAAGCTGCTTTGCAGCAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGGAAAGAGCGAAATCGTCTTCGAACACTTGCAGCACCTGTCTTGTCCCAGAGAACACATGACATGTCTGAGGATGATGTAGAAAGTCTTTGCCTGTCACTTGATATTGAGAAGTTGAGGAGTTTGTGCCAAATGTTTGAAGGAAAGCCCATCTCAGAGAAAGCAGAAATTCTGAGAGATGCTTGTGGTTCTAAAAAAGATGCAGATGACAAGAAACATAGGAAAACTGATAAAAAGGATAGTTCTGCAAGTACTAATGGCAGTGCCTTACTAGGCAACGCCAATGAAAAGAAGGAAAAACCTTGGAGTAAAGAAGAGATCGAGCTATTGAGAAAAGCCATGCAAAAATATCCTAAAGGAACTTCTCGGAGGTGGGAGGTCGTTTCAGAGTACATTGGTACAGGAAGATCTGTGGAAGAAATTTTGAAGGCAACCAAAACAGTTCTCCTCCAGAAGCCTGATTCTTCCAAATCGTTTGATGCGTTCCTTGAGAAAAGGAAACCCGCACCATCAATTGCATCTCCGCTCTCAACCCGAGAAGAATTAACCGGTGAATCAGCTCCTGGAAGACCTGCTAACAATGCTACCTTAGCAACAAATAACTCTGAGGGGTCTCACGGCAATATTACTTCAGACAGCCCAAGCTCTTCTGGTTCTGCGACAGTCAATGGATCTTCCTCTAGTTCAGGTCAAGATGTGTGGTCTGCTGTTCAGGAAAAAGCACTGGTCCAGGCTCTGAAAGCTTTCCCCAAAGAAACTAACCAGAGATGGGAACGAGTTGCGGCTGCTGTTCCCGGGAAGACCGTGAATCAGTGCAAGAAAAAATTTGCAATGTTGAAGGAGAACTTCAGAAGCAAGAAAAGTGCAGCTTAA 1956 0.4284 MMAKHANLRLIAYSQEIVDGQPIFVSSNCFPIKASNFEPAGHAFHSAALKLLGVEEDNADGDDEKVVDDKEKMYFASSDSYSSKGKKKSGAGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEAAKQAKKDEIDSHFKAVQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCSPQDFFKVFGPAFMRNGRWSINQPVPSLGDDNTPLKEVDAFYDFWYAFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRALVDNAYKRDPRIMRRKEEEKAEKKRKKEAKILAKKLQEEEAARIAEEEKRQKEEEERQAAEAALQQKKVKEKEKKLLRKERNRLRTLAAPVLSQRTHDMSEDDVESLCLSLDIEKLRSLCQMFEGKPISEKAEILRDACGSKKDADDKKHRKTDKKDSSASTNGSALLGNANEKKEKPWSKEEIELLRKAMQKYPKGTSRRWEVVSEYIGTGRSVEEILKATKTVLLQKPDSSKSFDAFLEKRKPAPSIASPLSTREELTGESAPGRPANNATLATNNSEGSHGNITSDSPSSSGSATVNGSSSSSGQDVWSAVQEKALVQALKAFPKETNQRWERVAAAVPGKTVNQCKKKFAMLKENFRSKKSAA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4193g00058 651 MobiDBLite consensus disorder prediction 424 463 - -
Pral4193g00058 651 Pfam DnaJ domain 97 176 IPR001623 -
Pral4193g00058 651 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Pral4193g00058 651 ProSiteProfiles SANT domain profile. 590 645 IPR017884 -
Pral4193g00058 651 PRINTS DnaJ domain signature 151 171 IPR001623 -
Pral4193g00058 651 PRINTS DnaJ domain signature 120 135 IPR001623 -
Pral4193g00058 651 PRINTS DnaJ domain signature 49 67 IPR001623 -
Pral4193g00058 651 CDD SANT 595 641 IPR001005 -
Pral4193g00058 651 MobiDBLite consensus disorder prediction 520 594 - -
Pral4193g00058 651 MobiDBLite consensus disorder prediction 550 594 - -
Pral4193g00058 651 Gene3D DnaJ domain 80 190 IPR036869 -
Pral4193g00058 651 ProSiteProfiles Myb-like domain profile. 587 641 IPR001005 -
Pral4193g00058 651 CDD SANT 462 502 IPR001005 -
Pral4193g00058 651 SUPERFAMILY Homeodomain-like 461 504 IPR009057 -
Pral4193g00058 651 SUPERFAMILY Homeodomain-like 593 647 IPR009057 -
Pral4193g00058 651 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 3 650 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Pral4193g00058 651 MobiDBLite consensus disorder prediction 333 360 - -
Pral4193g00058 651 CDD DnaJ 97 168 IPR001623 -
Pral4193g00058 651 MobiDBLite consensus disorder prediction 424 442 - -
Pral4193g00058 651 SMART dnaj_3 96 171 IPR001623 -
Pral4193g00058 651 Gene3D - 455 513 - -
Pral4193g00058 651 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Pral4193g00058 651 SUPERFAMILY Chaperone J-domain 95 203 IPR036869 -
Pral4193g00058 651 FunFam Myb family transcription factor 589 649 - -
Pral4193g00058 651 ProSiteProfiles Myb-like domain profile. 455 510 IPR001005 -
Pral4193g00058 651 SMART sant 459 512 IPR001005 -
Pral4193g00058 651 SMART sant 591 643 IPR001005 -
Pral4193g00058 651 Coils Coil 303 371 - -
Pral4193g00058 651 Gene3D - 585 651 - -
Pral4193g00058 651 Pfam Myb-like DNA-binding domain 594 640 IPR001005 -
Pral4193g00058 651 Pfam Myb-like DNA-binding domain 461 502 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4193g00058 Pral-Chr4193 530163 533869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4193g00058 98 297 C2H2 Transcription Factor Family AT1G74250 29.707 5.77e-19 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4193g00058 DnaJ 4.6e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4193g00058 K09522 - pvy:116115139 831.632