Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4193g00057 ATGGATTATAAAGGTGATCTTCCCCAGAAGCCTCCAATCAAGGGAATGAAGGGCATTGAAGAATCAGTTTTCTTGCACGGGGACTTGGATCTTCATATCATAGAAGCAAAAAATCTTCCAAATATGGATTGTCATACTGAAACCATGAGAAAATGTTTAACTGCAGGAAACAATTGTGCACCTCCCTTTGTAAAAGGACTCAAGACACACTCTGGAAAACATAAAATGATCACTAGCGATCCTTATGTCTCTGTCTCTCTAGCAGGGGCTACTGTAGTTCAAACTAGAGTCATATCTAATTGTGAGAACCCAGTGTGGGATGAACATTTTGTTGTGCCAGTTGCTCACCCTGTTCAAAAAGTTGTGTTTCTTGTGAAAGATGATGACGTTTTTGGAGCTGAACTCATTGGAGTAGTGGAGATATCTGTTCAGAAGATTTTGCTGGGAAACACTCTTAATGATTGGTTTCCCATCGTCGGTAATGGAAACTGCTTAAAGCCTTATCCTGAATTGCATATCTCTTTAAAGTTTTTGGCCGTGGGGGACAAGAATCGGACAAGTTATTTTGGTGTTCCTAATACATATTTCCCTCTCCGAAAAGGAGGGAGTGTGACTCTTTATCAAGATGCACATGTACCAAATGGTATGCTACCCGAAATTCCACTTGAGGGGGGAAAGGTCTTTAACCAGGGTAGATGTTGGGAGGATATATGCCATGCCATTTTGGAAGCTCACCATTTAATATATATCATTGGGTGGTCTATTTACCACCCTATAAAGCTCGTCAGAGAACCAACAAAACCGATACCTGCTGGTGGAGAGCTTTCACTTGGAGAATTGTTGAAATACAAATCACAAGAAGGAGTCCGCGTGGTTATCTTGATTTGGGACGACAGAACATCACATGACACCTTTTTTTTAAAAACGGAAGGTGTCATGCAGACACATGATGAAGCAACCAAAAAATTCTTTAAACACTCCACTGTCCATTGCGTGCTATCTCCACGTTATCCAAGCAATAAACTCAGTATTTTCAAGCAACATGTTGTGGGAACTCTTTTTACACATCATCAGAAGTGCGTGCTTCTTGACACTCAAGCTTCTGGGAATAATAGGAAAATAACTGCTTTTATTGGTGGCCTTGATCTATGTGACGGCAGATATGATACCCCTGAGCACCGGCTTTTCACTGATCTTGATACTGTCTTTAGAGATGATTTCCATAATCCTATACTTTCGCTTTCCAGCTGTACTAGTGGACCAAGAGAGCCATGGCATGACTTGCATTGCAAAGTTGAGGGCCCAGCTGCATATGATATATTAACTAATTTTGAGCAAAGATGGAGGAAAGCCAAAAAATGGCGTAACTTAAGGCTAAACAAGGTTACAAATTGGTATGATGATGCTTTACTAAGGCTAGATCGAATATCATGGATTGTCACACCAGCTATTGGTGTGGGTGATGACACAAGTGTCTATGTAACTGAAGAAAACGATCCTGAGACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAGGATGCTATGGAAGCTAAGGCTCAGAATCTTATCTGCGGAAAAAATTTGAAAGTTGACAAAAGCATTCATGCTGCTTATGTATATGCAATAAGATCAGCTCAACGCTTCATATATATAGAGAATCAATATTTTCTTGGATCCTCGTTTCATTGGCCTACCTACAAAACTGCAGGTGCACATAACTTGGTTCCTATGGAGTTGGCTTTGAAAATTGCCAGCAAGATCAGTGCCAGAGAACGTTTTGCTGTGTATATAGTAATCCCCATGTGGCCAGAAGGGGTTCCATCTAGTGCTGCTGTACAGGAAATCTTGTTCTGGCAGGGGCAGACAATGTCTATGATGTACAGGATTGTTGCAGATGCCCTTCAAAAGGCAGGTCTCGCTGACCGTTCTCACCCACAAGATTATCTCAACTTTTATTGCCTCGGAAAGCGTGAGCCTCAAATATCTCAAAGTCCATCACCGGATTTTCAATCAGCTGAAAACCGTACTTTGACATCGGTGAAAAAATTCAGACGGTTTATGATCTATGTTCATGCCAAAGGAATGATAATTGATGATGAGTACGTCCTCATTGGATCTGCAAATATTAACGAGAGATCTTTGGATGGTTCAAGGGATACAGAAATCGCAATGGGTGCTTATCAACCAAAATACACAAAGAAAGCAAAGAAGGCTCGCCCACATGGCCAGGTGTATGGTTACCGAATGTCATTGTGGGCTGAGCATCTGGGTAGTGTTGAAGATACTCTTGATGAACCAGAGAGCCTGCAATGTGTGAGATATGTCAACAATGTTGCCAAAAGGAACTGGTCTGCATATGTGTCCGACGATGCAGGGATCATGTGGGGACACTTGATGCAGTATCCAGTTCAAATCAGTGCAGACGGGACGGTCACTGCACTTCCAGATCATGAGACCTTTCCTGATGTTGGTGGTAAAATTCTTGGATCCCCCAACTCTCTTCCTGATCAACTAACCACGTGA 2550 0.4196 MDYKGDLPQKPPIKGMKGIEESVFLHGDLDLHIIEAKNLPNMDCHTETMRKCLTAGNNCAPPFVKGLKTHSGKHKMITSDPYVSVSLAGATVVQTRVISNCENPVWDEHFVVPVAHPVQKVVFLVKDDDVFGAELIGVVEISVQKILLGNTLNDWFPIVGNGNCLKPYPELHISLKFLAVGDKNRTSYFGVPNTYFPLRKGGSVTLYQDAHVPNGMLPEIPLEGGKVFNQGRCWEDICHAILEAHHLIYIIGWSIYHPIKLVREPTKPIPAGGELSLGELLKYKSQEGVRVVILIWDDRTSHDTFFLKTEGVMQTHDEATKKFFKHSTVHCVLSPRYPSNKLSIFKQHVVGTLFTHHQKCVLLDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFTDLDTVFRDDFHNPILSLSSCTSGPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRNLRLNKVTNWYDDALLRLDRISWIVTPAIGVGDDTSVYVTEENDPETWNVQVFRSIDSGSVKGFPKDAMEAKAQNLICGKNLKVDKSIHAAYVYAIRSAQRFIYIENQYFLGSSFHWPTYKTAGAHNLVPMELALKIASKISARERFAVYIVIPMWPEGVPSSAAVQEILFWQGQTMSMMYRIVADALQKAGLADRSHPQDYLNFYCLGKREPQISQSPSPDFQSAENRTLTSVKKFRRFMIYVHAKGMIIDDEYVLIGSANINERSLDGSRDTEIAMGAYQPKYTKKAKKARPHGQVYGYRMSLWAEHLGSVEDTLDEPESLQCVRYVNNVAKRNWSAYVSDDAGIMWGHLMQYPVQISADGTVTALPDHETFPDVGGKILGSPNSLPDQLTT 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4193g00057 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Pral4193g00057 849 SMART pld_4 695 722 IPR001736 GO:0003824
Pral4193g00057 849 SMART pld_4 352 387 IPR001736 GO:0003824
Pral4193g00057 849 Pfam Phospholipase D Active site motif 353 387 IPR001736 GO:0003824
Pral4193g00057 849 Pfam C2 domain 27 158 IPR000008 -
Pral4193g00057 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 24 178 IPR035892 -
Pral4193g00057 849 PANTHER PHOSPHOLIPASE D 19 838 IPR015679 -
Pral4193g00057 849 SUPERFAMILY Phospholipase D/nuclease 191 458 - -
Pral4193g00057 849 Gene3D Endonuclease Chain A 225 469 - -
Pral4193g00057 849 ProSiteProfiles C2 domain profile. 9 156 IPR000008 -
Pral4193g00057 849 CDD C2_plant_PLD 23 178 - -
Pral4193g00057 849 Pfam Phospholipase D C terminal 769 839 IPR024632 -
Pral4193g00057 849 PIRSF PLD_plant 14 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral4193g00057 849 Gene3D Endonuclease Chain A 480 751 - -
Pral4193g00057 849 FunFam Phospholipase D delta 224 469 - -
Pral4193g00057 849 SUPERFAMILY Phospholipase D/nuclease 543 779 - -
Pral4193g00057 849 SMART C2_3c 28 155 IPR000008 -
Pral4193g00057 849 Gene3D C2 domain 23 177 IPR035892 -
Pral4193g00057 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 352 387 IPR001736 GO:0003824
Pral4193g00057 849 Pfam PLD-like domain 551 744 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4193g00057 Pral-Chr4193 518711 527530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4193g00057 17 848 Phospholipase D Gene Family (Wang group) AT2G42010 52.589 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4193g00057 K01115 - gmx:100779740 1364.36