Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4193g00046 ATGTGCAGGTGTTGGGAGAGTTTAATGGTGGTGCTGGTGGCATACTCAGCATGGGTGTATCCCTTTGAAATAGGGTTTCTGATGTCATCTCCAAAGCACAAATTGTTCATTGTGGATAATGTGGTTGATCTCTTCTTTGCAGTTGACATTGTTCTCACTTTCTTCCTTGCTTACATTGATCGTTCTACCCAGCTCCTTGTTCGAGACCCCAAAAAAATTGCCCACAGGTACTTATCAACATGGTTCATAATGGACGTGGCATCAACCATACCATATGAGGCATTGGGTTATTTGATCACAGGCAAACGCAAAGTGGCTCTTCCTTTCTTCCTTTTGGGTGTCCTTAGACTCTGGAGGCTTCGACGAGTCAAGCAATACTTCACCAGGCTTGAGAAAGACATCAGGTTCAACTATTTTTTTATCAGATGCCTTAGACTTCTTTGTGTAACATATTTTATAGCACACTGTGGTGGGTGTCTGTACTACCTACTAGCAGACGTGCATTCAAATTTAGGGAGGACATGGATTGGAACAGTAAATCCCAATTTCAAAGAGACAAGCATTTGGAGAAGATACATATCAGCCATGTACTGGTCCCTCACCACCATGACTACTGTAGGCTATGGTGACTTCCATGCTGTGAATCCCATAGAGATGGCCTTCACCATCTGCTATATGCTCTTCAATCTTGGCCTCACTGCTTACTTGATTGGCAACATGACCAATCTTGTGGTCCAAGGAACCGGTCGTACCATGGAATTCAGAAACAACATTGAAGAAGCATCAAATTTTGCGCGCAGAAATGGAGTATCTGCGAGGCTGAAAGAGCAAATCATTTCTTATATGTTTTTAAGATACAAGGCAGAGAGTATGAACCATCATCAGCTTATGGAACAACTGCCAAAATCAATACGCAAAAGCATTTGTCAACACTTGTTCCTTCCAGCTGCAGAAAAAGTTTATCTTTTCCAAGGTGTCTCAAGAGACATCTTGTTGTCCTTGGCTGCAAAAATGAAGGCTGAGTATATACCTCCAAAAGAAGATGTGATCATGCAAGGTGAATCAGCAGAGGATGTTTACATAATCGTGTCTGGAGAAGTGGGGATCATTGATTATGTAATGAACAAAGAGAATATTATAGGGATTTTACAAAGATGGGACATGTTTGGAGAAGTTGGGGCACTTTGTTGGAAGCCTCAGAGCTTTACTTACAGAACCAGGACTCTCACACAGCTCCTGAGGCTCAAAACCAGTGATTTTACAGAGACAATGCAGACTAGAAAAGAAGACAATAGAAAAATACTGGAAAATTTCCTTCGGCATTTGAAGAAGCTACACGATATAAGTTCTAGAGAATTGCTGATTGATTTGAGCAGAGAAGAGGATCCGAATACGGCTGTGAACTTGTTACATGTGGCCTCAACTGGCAATGCTGCTTTTCTTGAAGAGCTTTTGAAGGCTGGCTTGGATTCTGGTGTTACAGACTCCAAAGGCAGAACCCCATTGCACATAGCAGCATTAAATGGACACGAAGAGTGTGTAAAAGTGTTACTTAACCATGCATGCAATATACATGCAAAAGACATAAATGGCAACACTGCATTGTGGGACGCCATAGCTTCAAAGCGTCACTCAATATTCAGAATCCTGTACCAGCTTGCTGTGCTCTCGGATCCACACACAGCAGGTGATCTTCTTTGTAAAGCAGCAAAGAGAAATGACCTAACAGTGATGAGTGAGCTTTTAAAACAAGGCTTGAACATAGAGTCCAAAGATCACCATGGTTCAACGCCAATGCAAGTTGCCTTGCAAGAGAATCATTTGGAAATGATTCAATTGCTTTTCATGAATGGCTCAGATGTTGTTTCTGCTCTCAATGATAAACATGAAGGAGGGCAAGACAATATTTTGGGAACATATAATAATAACAATAGGCAAATCCCTTCAAGAGTTAGCATATTTAGAGGCAATCCTATATTGAGAAGACAACAAGGTTGCATTGAACCTGGCAAGATGATAAAGTTCCCTCAGTCAATAGAGGAGCTTAAGAGCATTGCAGGTGAAAGATTTGGGTTCGATGCAAAAGATGCGATGGTGACTGATGAAGGAGGAGCAGAACTAGAATCTATTGATTTGATCAGAGATAATGATAAGCTTTTTATTGTTGAATAG 2172 0.4125 MCRCWESLMVVLVAYSAWVYPFEIGFLMSSPKHKLFIVDNVVDLFFAVDIVLTFFLAYIDRSTQLLVRDPKKIAHRYLSTWFIMDVASTIPYEALGYLITGKRKVALPFFLLGVLRLWRLRRVKQYFTRLEKDIRFNYFFIRCLRLLCVTYFIAHCGGCLYYLLADVHSNLGRTWIGTVNPNFKETSIWRRYISAMYWSLTTMTTVGYGDFHAVNPIEMAFTICYMLFNLGLTAYLIGNMTNLVVQGTGRTMEFRNNIEEASNFARRNGVSARLKEQIISYMFLRYKAESMNHHQLMEQLPKSIRKSICQHLFLPAAEKVYLFQGVSRDILLSLAAKMKAEYIPPKEDVIMQGESAEDVYIIVSGEVGIIDYVMNKENIIGILQRWDMFGEVGALCWKPQSFTYRTRTLTQLLRLKTSDFTETMQTRKEDNRKILENFLRHLKKLHDISSRELLIDLSREEDPNTAVNLLHVASTGNAAFLEELLKAGLDSGVTDSKGRTPLHIAALNGHEECVKVLLNHACNIHAKDINGNTALWDAIASKRHSIFRILYQLAVLSDPHTAGDLLCKAAKRNDLTVMSELLKQGLNIESKDHHGSTPMQVALQENHLEMIQLLFMNGSDVVSALNDKHEGGQDNILGTYNNNNRQIPSRVSIFRGNPILRRQQGCIEPGKMIKFPQSIEELKSIAGERFGFDAKDAMVTDEGGAELESIDLIRDNDKLFIVE 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4193g00046 723 CDD CAP_ED 322 435 IPR000595 -
Pral4193g00046 723 ProSiteProfiles Ankyrin repeat region circular profile. 497 528 - -
Pral4193g00046 723 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 349 365 IPR018488 -
Pral4193g00046 723 PRINTS Ankyrin repeat signature 498 513 IPR002110 GO:0005515
Pral4193g00046 723 PRINTS Ankyrin repeat signature 610 624 IPR002110 GO:0005515
Pral4193g00046 723 Gene3D - 465 553 IPR036770 -
Pral4193g00046 723 Pfam Cyclic nucleotide-binding domain 342 426 IPR000595 -
Pral4193g00046 723 FunFam Potassium channel KAT2 310 446 - -
Pral4193g00046 723 SUPERFAMILY Voltage-gated potassium channels 3 245 - -
Pral4193g00046 723 FunFam Potassium channel KAT3 4 246 - -
Pral4193g00046 723 ProSiteProfiles Ankyrin repeat profile. 594 621 IPR002110 GO:0005515
Pral4193g00046 723 Gene3D Jelly Rolls 316 451 IPR014710 -
Pral4193g00046 723 Gene3D Helix hairpin bin 250 313 - -
Pral4193g00046 723 SUPERFAMILY Ankyrin repeat 462 621 IPR036770 -
Pral4193g00046 723 ProSiteProfiles Ankyrin repeat profile. 497 529 IPR002110 GO:0005515
Pral4193g00046 723 Pfam KHA, dimerisation domain of potassium ion channel 650 721 IPR021789 -
Pral4193g00046 723 Gene3D - 4 246 - -
Pral4193g00046 723 SMART ANK_2a 465 493 IPR002110 GO:0005515
Pral4193g00046 723 SMART ANK_2a 497 526 IPR002110 GO:0005515
Pral4193g00046 723 SMART ANK_2a 530 561 IPR002110 GO:0005515
Pral4193g00046 723 SMART ANK_2a 594 623 IPR002110 GO:0005515
Pral4193g00046 723 Gene3D - 557 640 IPR036770 -
Pral4193g00046 723 ProSiteProfiles cAMP/cGMP binding motif profile. 322 441 IPR000595 -
Pral4193g00046 723 SUPERFAMILY cAMP-binding domain-like 250 442 IPR018490 -
Pral4193g00046 723 Pfam Ankyrin repeats (3 copies) 470 551 IPR002110 GO:0005515
Pral4193g00046 723 Pfam Ion transport protein 3 248 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral4193g00046 723 ProSiteProfiles KHA domain profile. 650 723 IPR021789 -
Pral4193g00046 723 ProSiteProfiles Ankyrin repeat region circular profile. 594 621 - -
Pral4193g00046 723 PRINTS EAG/ELK/ERG potassium channel family signature 50 59 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00046 723 PRINTS EAG/ELK/ERG potassium channel family signature 218 229 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00046 723 PRINTS EAG/ELK/ERG potassium channel family signature 192 209 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00046 723 PRINTS EAG/ELK/ERG potassium channel family signature 236 245 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00046 723 PRINTS EAG/ELK/ERG potassium channel family signature 39 49 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00046 723 SMART cnmp_10 322 439 IPR000595 -
Pral4193g00046 723 PANTHER POTASSIUM CHANNEL AKT1 3 722 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4193g00046 Pral-Chr4193 395488 403754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4193g00046 3 502 Ion Channels AT4G22200 66.071 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4193g00046 K21867 - gmx:100811465 991.49