Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4193g00045 ATGGAGAAGGAGGATTCAGGCTCACACAATCATCATCAGGTAGCTTCCAGCTTGAATCAGAATGAGCAGAAACAGCAGAAGGAGTTGGAAGAACAGCCTCATCTTGAAGAAGATTATGAATCTCCAACTTTCAATCTGCAGAATGTTTCAAAAGTGATCCTTCCTCCATTGGGTGCTTCAAGTTATAATCAGAATCCAACTAACTCAAAAGGATGGATCATATCTCCAATGGATAGAAGATACAGGTGTTGGGAGAGTTTAATGGTGGTGCTGGTGGCATACTCAGCATGGGTGTATCCCTTTGAAATAGGGTTTCTGATGTCATCTCCAAAGCACAAATTGTTCATTGTGGATAATGTGGTTGATCTCTTCTTTGCAGTTGACATTGTTCTCACTTTCTTCCTTGCTTACATTGATCGTTCTACCCAGCTCCTTGTTCGAGACCCCAAAAAAATTGCCCACAGGTACTTATCAACATGGTTCATAATGGACGTGGCATCAACCATACCATATGAGGCATTGGGTTATTTGATCACAGGCAAACGCAAAGTGGCTCTTCCTTTCTTCCTTTTGGGTGTCCTTAGACTCTGGAGGCTTCGACGAGTCAAGCAATACTTCACCAGGCTTGAGAAAGACATCAGGTTCAACTATTTTTTTATCAGATGCCTTAGACTTCTTTGTGTAACATATTTTATAGCACACTGTGGTGGGTGTCTGTACTACCTACTAGCAGACGTGCATTCAAATTTAGGGAGGACATGGATTGGAACAGTAAATCCCAATTTCAAAGAGACAAGCATTTGGAGAAGATACATATCAGCCATGTACTGGTCCCTCACCACCATGACTACTGTAGGCTATGGTGACTTCCATGCTGTGAATCCCATAGAGATGGCCTTCACCATCTGCTATATGCTCTTCAATCTTGGCCTCACTGCTTACTTGATTGGCAACATGACCAATCTTGTGGTCCAAGGAACCGGTCGTACCATGGAATTCAGAAACAACATTGAAGAAGCATCAAATTTTGCGCGCAGAAATGGAGTATCTGCGAGGCTGAAAGAGCAAATCATTTCTTATATGTTTTTAAGATACAAGGCAGAGAGTATGAACCATCATCAGCTTATGGAACAACTGCCAAAATCAATACGCAAAAGCATTTGTCAACACTTGTTCCTTCCAGCTGCAGAAAAAGTTTATCTTTTCCAAGGTGTCTCAAGAGACATCTTGTTGTCCTTGGCTGCAAAAATGAAGGCTGAGTATATACCTCCAAAAGAAGATGTGATCATGCAAGGTGAATCAGCAGAGGATGTTTACATAATCGTGTCTGGAGAAGTGGGGATCATTGATTATGTAATGAACAAAGAGAATATTATAGGGATTTTACAAAGATGGGACATGTTTGGAGAAGTTGGGGCACTTTGTTGGAAGCCTCAGAGCTTTACTTACAGAACCAGGACTCTCACACAGCTCCTGAGGCTCAAAACCAGTGATTTTACAGAGACAATGCAGACTAGAAAAGAAGACAATAGAAAAATACTGGAAAATTTCCTTCGGCATTTGAAGAAGCTACACGATATAAGTTCTAGAGAATTGCTGATTGATTTGAGCAGAGAAGAGGATCCGAATACGGCTGTGAACTTGTTACATGTGGCCTCAACTGGCAATGCTGCTTTTCTTGAAGAGCTTTTGAAGGCTGGCTTGGATTCTGGTGTTACAGACTCCAAAGGCAGAACCCCATTGCACATAGCAGCATTAAATGGACACGAAGAGTGTGTAAAAGTGTTACTTAACCATGCATGCAATATACATGCAAAAGACATAAATGGCAACACTGCATTGTGGGACGCCATAGCTTCAAAGCGTCACTCAATATTCAGAATCCTGTACCAGCTTGCTGTGCTCTCGGATCCACACACAGCAGGTGATCTTCTTTGTAAAGCAGCAAAGAGAAATGACCTAACAGTGATGAGTGAGCTTTTAAAACAAGGCTTGAACATAGAGTCCAAAGATCACCATGGTTCAACGCCAATGCAAGTTGCCTTGCAAGAGAATCATTTGGAAATGATTCAATTGCTTTTCATGAATGGCTCAGATGTTGTTTCTGCTCTCAATGATAAACATGAAGGAGGGCAAGACAATATTTTGGGAACATATAATAATAACAATAGGCAAATCCCTTCAAGAGTTAGCATATTTAGAGGCAATCCTATATTGAGAAGACAACAAGGTTGCATTGAACCTGGCAAGATGATAAAGTTCCCTCAGTCAATAGAGGAGCTTAAGAGCATTGCAGGTGAAAGATTTGGGTTCGATGCAAAAGATGCGATGGTGACTGATGAAGGAGGAGCAGAACTAGAATCTATTGATTTGATCAGAGATAATGATAAGCTTTTTATTGTTGAATAG 2409 0.4114 MEKEDSGSHNHHQVASSLNQNEQKQQKELEEQPHLEEDYESPTFNLQNVSKVILPPLGASSYNQNPTNSKGWIISPMDRRYRCWESLMVVLVAYSAWVYPFEIGFLMSSPKHKLFIVDNVVDLFFAVDIVLTFFLAYIDRSTQLLVRDPKKIAHRYLSTWFIMDVASTIPYEALGYLITGKRKVALPFFLLGVLRLWRLRRVKQYFTRLEKDIRFNYFFIRCLRLLCVTYFIAHCGGCLYYLLADVHSNLGRTWIGTVNPNFKETSIWRRYISAMYWSLTTMTTVGYGDFHAVNPIEMAFTICYMLFNLGLTAYLIGNMTNLVVQGTGRTMEFRNNIEEASNFARRNGVSARLKEQIISYMFLRYKAESMNHHQLMEQLPKSIRKSICQHLFLPAAEKVYLFQGVSRDILLSLAAKMKAEYIPPKEDVIMQGESAEDVYIIVSGEVGIIDYVMNKENIIGILQRWDMFGEVGALCWKPQSFTYRTRTLTQLLRLKTSDFTETMQTRKEDNRKILENFLRHLKKLHDISSRELLIDLSREEDPNTAVNLLHVASTGNAAFLEELLKAGLDSGVTDSKGRTPLHIAALNGHEECVKVLLNHACNIHAKDINGNTALWDAIASKRHSIFRILYQLAVLSDPHTAGDLLCKAAKRNDLTVMSELLKQGLNIESKDHHGSTPMQVALQENHLEMIQLLFMNGSDVVSALNDKHEGGQDNILGTYNNNNRQIPSRVSIFRGNPILRRQQGCIEPGKMIKFPQSIEELKSIAGERFGFDAKDAMVTDEGGAELESIDLIRDNDKLFIVE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4193g00045 802 ProSiteProfiles Ankyrin repeat profile. 576 608 IPR002110 GO:0005515
Pral4193g00045 802 SUPERFAMILY Ankyrin repeat 541 700 IPR036770 -
Pral4193g00045 802 PANTHER POTASSIUM CHANNEL AKT1 46 801 IPR045319 GO:0005249|GO:0006813
Pral4193g00045 802 Gene3D Jelly Rolls 395 530 IPR014710 -
Pral4193g00045 802 ProSiteProfiles KHA domain profile. 729 802 IPR021789 -
Pral4193g00045 802 Gene3D - 82 325 - -
Pral4193g00045 802 ProSiteProfiles Ankyrin repeat region circular profile. 673 700 - -
Pral4193g00045 802 FunFam Potassium channel KAT2 389 525 - -
Pral4193g00045 802 ProSiteProfiles cAMP/cGMP binding motif profile. 401 520 IPR000595 -
Pral4193g00045 802 SUPERFAMILY Voltage-gated potassium channels 76 324 - -
Pral4193g00045 802 CDD CAP_ED 401 514 IPR000595 -
Pral4193g00045 802 Pfam Ion transport protein 82 327 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral4193g00045 802 ProSiteProfiles Ankyrin repeat region circular profile. 576 607 - -
Pral4193g00045 802 Gene3D Helix hairpin bin 329 392 - -
Pral4193g00045 802 PRINTS Ankyrin repeat signature 577 592 IPR002110 GO:0005515
Pral4193g00045 802 PRINTS Ankyrin repeat signature 689 703 IPR002110 GO:0005515
Pral4193g00045 802 Pfam Ankyrin repeats (3 copies) 549 630 IPR002110 GO:0005515
Pral4193g00045 802 MobiDBLite consensus disorder prediction 1 37 - -
Pral4193g00045 802 SMART ANK_2a 576 605 IPR002110 GO:0005515
Pral4193g00045 802 SMART ANK_2a 544 572 IPR002110 GO:0005515
Pral4193g00045 802 SMART ANK_2a 609 640 IPR002110 GO:0005515
Pral4193g00045 802 SMART ANK_2a 673 702 IPR002110 GO:0005515
Pral4193g00045 802 SUPERFAMILY cAMP-binding domain-like 329 521 IPR018490 -
Pral4193g00045 802 ProSiteProfiles Ankyrin repeat profile. 673 700 IPR002110 GO:0005515
Pral4193g00045 802 FunFam Potassium channel KAT3 83 325 - -
Pral4193g00045 802 Pfam Cyclic nucleotide-binding domain 421 505 IPR000595 -
Pral4193g00045 802 Coils Coil 12 32 - -
Pral4193g00045 802 Pfam KHA, dimerisation domain of potassium ion channel 729 800 IPR021789 -
Pral4193g00045 802 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 428 444 IPR018488 -
Pral4193g00045 802 PRINTS EAG/ELK/ERG potassium channel family signature 118 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00045 802 PRINTS EAG/ELK/ERG potassium channel family signature 315 324 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00045 802 PRINTS EAG/ELK/ERG potassium channel family signature 271 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00045 802 PRINTS EAG/ELK/ERG potassium channel family signature 297 308 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00045 802 PRINTS EAG/ELK/ERG potassium channel family signature 129 138 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4193g00045 802 Gene3D - 636 719 IPR036770 -
Pral4193g00045 802 Gene3D - 544 632 IPR036770 -
Pral4193g00045 802 SMART cnmp_10 401 518 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4193g00045 Pral-Chr4193 395203 403754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4193g00045 36 581 Ion Channels AT4G22200 65.818 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4193g00045 K21867 - gmx:100811465 1061.98