Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4193g00026 ATGGATATGAGTGGTGATCGTCTTCGCGTTGTCGCCAATGGTGTTCCAAGAACCAGAACTTTCCACTATTTCTGGTGCCAAACTTGCCAGCGCGCTGTCAGAATCCCCTCCTCTGCAAACCCTAATTTCTCTTTCTGCCCCTTTTGCTCCCGTCAATTACACCTCGAACTCGATATCACGAGGCCCAGGCTTCTCATGAATAATCCTCCTAATTTGCAGCCTTCACCTGCCGCTCAATTGATCAACGGATTGGCTCTCATTCTGGATCCATCCATGAGAGAGCGAAACACTCGATTCGATCGAACAATTCGATGGACTGAAGAAACCGAAGAAGGACCGAATTCTCAGACCTGGATGACTCTCCGATTCGTGAGACCAACTCGTCCACAACTACACCTTCCCGGAGCCACCGAAGAAAACAGGCCGCCTCCGGCAGCAGACTCCGCCATCGAAGGGTTGCCGACGGTGAAAGTGACGGAAACACAATTGGCGACCGATCCGAATTGCGCGATTTGCAAAGACGAGTTTCAGATTGATATGGAAGTGAAGGAGTTACCGTGCAAGCATTTCTATCATTCGGATTGTATTACTCCTTGGCTTCGCATTCACAATACGTGTCCTATCTGCCGCCATGAGCTGCGAAGTGCTTCATCTTCTTCTTCATATTCAAATTTCCGTCAAGATTTCTCACATTTCGACTATCGATATGGATTTAGGTTTGAAGATGCTACAGAAGGTTTGAACTGGATTTGGAGCCAGCTTGTTTCGTTCCGACCTGTGCGTGCAATTGTAGAATGGGCTGAGAGATTTTTGTTTGATTTCCCGGAAAATCATGATCGAGGAGGTGGCCCGTGGTGGCGCTCATTGTTCATGTTATAG 879 0.4812 MDMSGDRLRVVANGVPRTRTFHYFWCQTCQRAVRIPSSANPNFSFCPFCSRQLHLELDITRPRLLMNNPPNLQPSPAAQLINGLALILDPSMRERNTRFDRTIRWTEETEEGPNSQTWMTLRFVRPTRPQLHLPGATEENRPPPAADSAIEGLPTVKVTETQLATDPNCAICKDEFQIDMEVKELPCKHFYHSDCITPWLRIHNTCPICRHELRSASSSSSYSNFRQDFSHFDYRYGFRFEDATEGLNWIWSQLVSFRPVRAIVEWAERFLFDFPENHDRGGGPWWRSLFML 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4193g00026 292 CDD RING-H2_RNF126-like 168 210 - -
Pral4193g00026 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 216 IPR013083 -
Pral4193g00026 292 ProSiteProfiles Zinc finger RING-type profile. 169 210 IPR001841 -
Pral4193g00026 292 SUPERFAMILY RING/U-box 149 216 - -
Pral4193g00026 292 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 107 213 - -
Pral4193g00026 292 Pfam Ring finger domain 168 210 IPR001841 -
Pral4193g00026 292 SMART ring_2 169 209 IPR001841 -
Pral4193g00026 292 FunFam E3 ubiquitin-protein ligase RING1-like 134 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4193g00026 Pral-Chr4193 179689 182283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4193g00026 4 271 C3H Transcription Factor Family AT1G68180 34.686 1.39e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4193g00026 K11982 - gmx:100793656 309.301