LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4193g00009	ATGAGAAGAGAGAAAGAAGAAGAAGAAGAAGTTGCAGAAGAGATGGGAATTGATCTGTCTTTGAAGATTAATGCTAATAAACAAGGAGAGGAAAGAGAGAGAATATTATTATTTGATGAGGAGAAGGGAAAGAAGGAATTAGAAGAAGCAGCTGATGAACAGATCACAGAAGGTGAAATAGAAGACGATGATGCATCAGTTGAAGAAATTTCTCTTCATCCAAACTTAGCTTCCACAGAGGAGCTAAGAGTGTTAAAAATGGAGATGGATCGTATGAAAGAGGAAAACAAAGTGTTGAGGAGAGTAGTGGAGCAAACCACGAAAGACTATTATGATCTCCAAATCAAATTCTCAGCCATCCATAATCCTCCTCTCAACAATATGAACAAGAAGGATCCTCAAATCTCTCTCACACTCCAAGGCAATAATGATAATAATATTGCAAACACCAGCACAAGTAGTGAAGAAGAAGGACCACCAGCACCACCGACAAACACTAACATTATTAAGGATGATTTGGGATTATCACTAAGGTTAAACACAATAAGTAGTACAAGTTCAGAAGATGAAGATTATGGAGGACGCAACATTAATAATCACAAACAAGATCATGTGGCTTCTCCCAATTATCAGTTGAATCGGCTTCATCATCATCATCACTTGCCTGTTTCTGCTTCTGCTACTGTTGCTGCTTCTCCTTCAAATAGAAAGGCTAGGGTTTGTGTCCGAGCAAGATGTGACTCAGCGACTATGAATGATGGTTGCCAGTGGAGAAAATATGGGCAGAAAATTGCCAAAGGAAATCCATGTCCTCGTGCCTATTATCGATGCACCGTAGCTCCAGGATGCCCTGTAAGGAAACAGGTACAAAGATGTATAGAGGACATGTCAATCTTAATTACAACCTACGAAGGAACACATAATCATCCTTTACCTGTAGGTGCCACAGCCATGGCTTCTACTGCTTCCACAGGAGCTAATTCCTTCATGTTCCTTGACTCTTCACAACCCTCCTTTGCTTCTTCTTCTCCCTCTTCCTCTACTTTCGTCCCTTACAATATCACAGCCCTAAACCCTAATAATAATCAGAATCATCATCCTTCTAAAGCTGGCCATGTCTTTGATCTCACAAACAACCACCCTAATTATAAAACCAGTCATTTCTCTGCAACTCATCAACCATCAGGTTTTTCTTGGATGCCAAACAGATCAATACTGAACTCTTTTCTCTGCCCTAGAGATCGTGGGAAAGAAGACGATGATGATGATAAGAAGAAGAAGAATGTTTCAGCTGATGCTAGGTTTAGGGTTTCTGTTGCTGCTGCAGCCGTTAACAACAATAAAGAGAGCCATCCTACTACCTTAGGATCTTCGTCCTCTTTTGGCCCTAGGAATGTTTAA	1401	0.4047	MRREKEEEEEVAEEMGIDLSLKINANKQGEERERILLFDEEKGKKELEEAADEQITEGEIEDDDASVEEISLHPNLASTEELRVLKMEMDRMKEENKVLRRVVEQTTKDYYDLQIKFSAIHNPPLNNMNKKDPQISLTLQGNNDNNIANTSTSSEEEGPPAPPTNTNIIKDDLGLSLRLNTISSTSSEDEDYGGRNINNHKQDHVASPNYQLNRLHHHHHLPVSASATVAASPSNRKARVCVRARCDSATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIEDMSILITTYEGTHNHPLPVGATAMASTASTGANSFMFLDSSQPSFASSSPSSSTFVPYNITALNPNNNQNHHPSKAGHVFDLTNNHPNYKTSHFSATHQPSGFSWMPNRSILNSFLCPRDRGKEDDDDDKKKKNVSADARFRVSVAAAAVNNNKESHPTTLGSSSSFGPRNV	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4193g00009	466	MobiDBLite	consensus disorder prediction	124	161	-	-
	Pral4193g00009	466	Pfam	WRKY DNA -binding domain	252	310	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pral4193g00009	466	Coils	Coil	75	109	-	-
	Pral4193g00009	466	MobiDBLite	consensus disorder prediction	443	466	-	-
	Pral4193g00009	466	Gene3D	WRKY domain	236	313	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Pral4193g00009	466	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	61	445	IPR044810	GO:0003700
	Pral4193g00009	466	MobiDBLite	consensus disorder prediction	410	466	-	-
	Pral4193g00009	466	MobiDBLite	consensus disorder prediction	47	66	-	-
	Pral4193g00009	466	FunFam	probable WRKY transcription factor 31	236	313	-	-
	Pral4193g00009	466	MobiDBLite	consensus disorder prediction	124	172	-	-
	Pral4193g00009	466	ProSiteProfiles	WRKY domain profile.	246	312	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pral4193g00009	466	MobiDBLite	consensus disorder prediction	52	66	-	-
	Pral4193g00009	466	SUPERFAMILY	WRKY DNA-binding domain	244	312	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Pral4193g00009	466	SMART	WRKY_cls	251	311	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pral4193g00009	466	MobiDBLite	consensus disorder prediction	412	432	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4193g00009	Pral-Chr4193	95387	98728	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4193g00009	15	373	WRKY Transcription Factor Family	AT1G68150	42.627	5.76e-79	248

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Pral4193g00009		WRKY	1.9e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4193g00009	-		-	lang:109350732	339.347