Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4192g00006 ATGGTGGAGGGTGGTGATCAGAGGCGGATGGGTGCAGGGGAGGGTTTGGAGGCCATGACTTTGGAGGATTTTTTGGCCAAGGCTGGAGCTGTAAGAGAGGAGGATGTCAGAGGGGTTCCTACCGTAGTACCTGGCCATGCGAGTTTCCGCGTGGATGCTGCGGCGACGGCCGCCGCCATCAACGGTGGCGCTCAGTTCCCGATGCCAACGCCGGTGCAGGTTAAGGAAGGGTCGTCCATAGAGGTTTTTGGAAATGGGATTGACGGGACAGTAGTTGGAGTTGCAGCATCAGCGGGAAGAGGGAAGCGAAGGATTGTGGAGGAACCCGTTGATAGGGCCACGCTTCAGAAGCAGAGAAGGATGATAAAAAACAGAGAGTCTGCAGCCAGGTCTAGAGAACGCAAGCAGGCTTACACTGTTGAGCTAGAGACTATGGTGACACAGCTCGAGGCAGAGAATGCACAACTATCGAGTGAAATGGCCGAAAAGGAGAAGCAGAGGTTCAAACAGCTCATGGAAAACCTTATTCCAGTGGTGGAGAAGCATAGACCACAACGAAAGATTCGGAGAGTGAATTCAGCCCACTGGTGA 591 0.5381 MVEGGDQRRMGAGEGLEAMTLEDFLAKAGAVREEDVRGVPTVVPGHASFRVDAAATAAAINGGAQFPMPTPVQVKEGSSIEVFGNGIDGTVVGVAASAGRGKRRIVEEPVDRATLQKQRRMIKNRESAARSRERKQAYTVELETMVTQLEAENAQLSSEMAEKEKQRFKQLMENLIPVVEKHRPQRKIRRVNSAHW 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4192g00006 196 SUPERFAMILY Leucine zipper domain 116 167 IPR046347 GO:0003700|GO:0006355
Pral4192g00006 196 Gene3D - 115 174 - -
Pral4192g00006 196 CDD bZIP_plant_BZIP46 116 156 - -
Pral4192g00006 196 SMART brlzneu 112 176 IPR004827 GO:0003700|GO:0006355
Pral4192g00006 196 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 115 174 - -
Pral4192g00006 196 Pfam bZIP transcription factor 114 173 IPR004827 GO:0003700|GO:0006355
Pral4192g00006 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 119 134 IPR004827 GO:0003700|GO:0006355
Pral4192g00006 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 114 166 IPR004827 GO:0003700|GO:0006355
Pral4192g00006 196 Coils Coil 139 171 - -
Pral4192g00006 196 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 193 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4192g00006 Pral-Chr4192 33583 38863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4192g00006 8 196 bZIP Transcription Factor Family AT5G44080 47.783 3.70e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4192g00006 bZIP_1 1.2e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4192g00006 K14432 - qsa:O6P43_012265 243.047