Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4191g00113 ATGGGAGATCCAGAGCATCACAGGAATGTCAATCTTCCTCCTGGGTTTCGCTTTTATCCTTCAGATGAAGAGCTCGTTGTCCACTTCCTTCACAGAAAAGCTTCCCTCTTGCCTTGCCACCCAGATGTCATCCCTGATCTTGACCTCTTCCCCTATGATCCTTGGGACCTCCATGGCAAGGCTTTAGGTGAAGGCAATCAATGGTACTACTTCAGCAGAAGGACGCAGAATAGGGTCACTAATAATGGCTATTGGAAACCAATGGGAATGGAAGAGCCAATAGTTACAAGCTCAGGAAGTAACCTTGTTGGAGTGAAGAAATATTTCATGTTCTTCATGGGAGAAGCTCCTTCTGGTATCAAAACCAATTGGATAATGCAGGAATATCGTCTATCTGATTCTTCTTCTTCCTCCTCCTCCTCTTCTTCCTCTAGCAGATCCTCAAGGAGAAAATCTAAAACAGATTACTGTAAATGGGTGATCTGTCGAGTTTACGAGCGTGACGACGATGATAATGATGGAGGAACTGAGCTGTCTTGTTTGGATGAAGTTTTCTTGTCACTGGATGATCTTGATGAAATCAGCCTTCCCCATTAA 597 0.4405 MGDPEHHRNVNLPPGFRFYPSDEELVVHFLHRKASLLPCHPDVIPDLDLFPYDPWDLHGKALGEGNQWYYFSRRTQNRVTNNGYWKPMGMEEPIVTSSGSNLVGVKKYFMFFMGEAPSGIKTNWIMQEYRLSDSSSSSSSSSSSSRSSRRKSKTDYCKWVICRVYERDDDDNDGGTELSCLDEVFLSLDDLDEISLPH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4191g00113 198 Gene3D NAC domain 21 171 IPR036093 GO:0003677|GO:0006355
Pral4191g00113 198 Pfam No apical meristem (NAM) protein 13 131 IPR003441 GO:0003677|GO:0006355
Pral4191g00113 198 ProSiteProfiles NAC domain profile. 12 167 IPR003441 GO:0003677|GO:0006355
Pral4191g00113 198 PANTHER NAC TRANSCRIPTION FACTOR 56 12 172 - -
Pral4191g00113 198 SUPERFAMILY NAC domain 8 166 IPR036093 GO:0003677|GO:0006355
Pral4191g00113 198 FunFam NAC domain-containing protein 104 21 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4191g00113 Pral-Chr4191 1521095 1522590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4191g00113 11 168 NAC Transcription Factor Family AT1G61110 43.373 2.74e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4191g00113 NAM 2.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4191g00113 - - pcin:129287174 361.303