LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4191g00102	ATGGGAAGTATAAAGGGAGTGATTTCGTCTCTGATGGGTTCGTTTGTTCTTTTGGCGATTTTAGTACTTGATTTGGTGCTAAAGGTTTCTGGCAATGCGGAAGGTGATGCCCTGAATGCATTGAGGACCAGTATGGCGGATCCTAACAATGTTCTTCAAAGTTGGGATCCCACCCTTGTGAATCCCTGTACGTGGTTTCATGTTACATGCAACAGTGACAATAGTGTGACCCGAGTTGATCTTGGAAATGCAAACCTTTCGGGTCAACTGGTTCCACAGCTCGGTCAGCTTGGAAATTTGCAATACTTGGAACTTTATAGTAATAATATAAGTGGAAAAATCCCGGACGAGCTGGGGAACTTGACCAACTTGGTGAGCTTGGATCTTTATTTGAACAGATTAAATGGTCCCATACCAAGCACTTTGAGCAAGCTTCAGAAATTACGCTTCCTGCGTCTCAATAATAACAGCTTGTCTGGAGGCATTCCTGTCTCGCTGACTAATGTTGCTTCACTGCAAGTCCTTGATCTTTCAAACAACCAGTTGAAAGGAGACATTCCAGTTAATGGTTCATTTTCATTGTTTACCCCCATCAGTTTTAATAATAATCCTGGACTGATACAACCAAAGGTCACTCCAAGTCCTCCATCTTCTCCAATGCCACAAGCAAGTTCAGGTAACAGTGATACTGCGGCTATTGCCGGTGGAGTTGCTGCTGGTGCTGCTTTGTTGTTTGCAGCCCCTGCAATTGCTCTTGCATATTGGCGAAGAAGGAAACCGCAAGAATATTTCTTTGATGTGCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAACGTTTTTCACTGCGTGAGCTGCAAGTTGCAACAGATAACTTTAGTAACAAAAACATTCTAGGTAGAGGTGGTTTTGGGAAAGTTTATAAAGGACGCTTAGCTGATGGTTCTCTAGTAGCAGTGAAAAGATTGAAAGAAGAACGCACCCAGGGTGGGGAGCTTCAATTTCAAACAGAAGTGGAAATGATTAGCTTAGCTGTGCATCGGAATTTACTTCGGCTGCGTGGTTTTTGCATGACACCAACGGAAAGGTTGCTTGTGTATCCTTTCATGGTTAATGGGAGTGTAGCATCATGTTTAAGAGAGCGTCCAGAATCACAACCACCACTCGACTGGCCAATACGTAAGCGTATTGCATTGGGAGCTGCCAGAGGACTTGCTTATCTGCATGATCATTGTGACCCAAAGATCATTCATCGTGATGTAAAGGCAGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGACTTTGGTCTTGCAAAACTCATGGATTACAAAGATACTCATGTTACTACTGCTGTCCGTGGTACAATTGGGCATATTGCACCAGAGTACCTCTCTACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTTATGCTTCTTGAGCTAATAACTGGACAAAGAGCTTTCGATCTTGCACGACTTGCCAACGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAAATTGGAGACGCTGGTGGATGCTGATTTACGGGGAAATTATATTGAAGAGGAGGTTGAGCAACTAATCCAGGTAGCTTTACTATGCACGCAAGGCACCCCTTTGGAAAGACCTAGAATGTCAGAGGTGGTCCGAATGCTTGAAGGTGACGGCCTGGCGGAGAAGTGGGAGCAATGGCAGAAAGAGGAGATGTTCCGGCAAGACTTCAACTACGTCCACCACCCCAATGCTAATTGGATAGTAGATTCAACCTCACACATCCCCCCAGATGAGTTATCGGGTCCTAGATGA	1857	0.4426	MGSIKGVISSLMGSFVLLAILVLDLVLKVSGNAEGDALNALRTSMADPNNVLQSWDPTLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVPQLGQLGNLQYLELYSNNISGKIPDELGNLTNLVSLDLYLNRLNGPIPSTLSKLQKLRFLRLNNNSLSGGIPVSLTNVASLQVLDLSNNQLKGDIPVNGSFSLFTPISFNNNPGLIQPKVTPSPPSSPMPQASSGNSDTAAIAGGVAAGAALLFAAPAIALAYWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERPESQPPLDWPIRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLRGNYIEEEVEQLIQVALLCTQGTPLERPRMSEVVRMLEGDGLAEKWEQWQKEEMFRQDFNYVHHPNANWIVDSTSHIPPDELSGPR	618

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4191g00102	618	MobiDBLite	consensus disorder prediction	208	228	-	-
	Pral4191g00102	618	Gene3D	Transferase(Phosphotransferase) domain 1	372	589	-	-
	Pral4191g00102	618	ProSitePatterns	Protein kinases ATP-binding region signature.	301	323	IPR017441	GO:0005524
	Pral4191g00102	618	SUPERFAMILY	L domain-like	34	200	-	-
	Pral4191g00102	618	SMART	serkin_6	295	569	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4191g00102	618	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	15	580	-	-
	Pral4191g00102	618	FunFam	Somatic embryogenesis receptor-like kinase 1	372	589	-	-
	Pral4191g00102	618	Gene3D	Ribonuclease Inhibitor	31	214	IPR032675	-
	Pral4191g00102	618	ProSiteProfiles	Protein kinase domain profile.	295	579	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4191g00102	618	Pfam	Leucine Rich Repeat	99	121	IPR001611	GO:0005515
	Pral4191g00102	618	FunFam	Somatic embryogenesis receptor kinase 1	264	371	-	-
	Pral4191g00102	618	Pfam	Leucine rich repeat N-terminal domain	32	71	IPR013210	-
	Pral4191g00102	618	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	418	430	IPR008271	GO:0004672\|GO:0006468
	Pral4191g00102	618	ProSiteProfiles	Leucine-rich repeat profile.	171	193	IPR001611	GO:0005515
	Pral4191g00102	618	Gene3D	Phosphorylase Kinase; domain 1	264	371	-	-
	Pral4191g00102	618	FunFam	Somatic embryogenesis receptor kinase 1	30	217	-	-
	Pral4191g00102	618	SUPERFAMILY	Protein kinase-like (PK-like)	274	570	IPR011009	-
	Pral4191g00102	618	Pfam	Protein kinase domain	296	566	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4191g00102	Pral-Chr4191	1412109	1420905	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4191g00102	11	618	Receptor kinase-like Gene Family	AT4G33430	78.267	0.0	983

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Pral4191g00102		Pkinase	2.1e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4191g00102	K13416		-	gmx:100800522	1053.12