Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4191g00094 ATGGAAGTTTTATCCTTCAGATCATCCCTAATTTTTCCCTATAGGCCCTCCCATGGCCTTAATCCACTCTCAAAAAATTTGCAAAGCCAAAAGCTTCATCCTTCGCATGTTTCATGCAGAGCAAGAAAGTTAGCTATTGAGGTAGAAGAAACAACTTCTGTCGATTTTTACAAGATGCTATCTCTGAATCCGAAGAGTGCAACCAAAGATGAGATAAAGAAGGCATATAGATCCATGGCACTTCAATACCACCCAGACACGTGCTTAGATCCTTTGAGGAAGGAGAAATGTACGAGGATGTTTGTACAGCTCCATGCAGCTTATGAGACATTATCAGACCCAGTGCTCCGAGAAGAGTATGATTATGAGCTTGACTTGATGACAAGCAAGAGGAATAAGAATAAGAGTGTTAATGGCGGTGATGAAAGATGGAGAAGAAGGTGGGAAGAGCAATTAGTTGAGTTGAAGAGAAGGTCTAATACAAGAATGGCTCAAAAGGAAGGATCATCATGGGGAAGTAGAATGAGGGCTCAAAACATGAAAAATCATAAATAA 555 0.4036 MEVLSFRSSLIFPYRPSHGLNPLSKNLQSQKLHPSHVSCRARKLAIEVEETTSVDFYKMLSLNPKSATKDEIKKAYRSMALQYHPDTCLDPLRKEKCTRMFVQLHAAYETLSDPVLREEYDYELDLMTSKRNKNKSVNGGDERWRRRWEEQLVELKRRSNTRMAQKEGSSWGSRMRAQNMKNHK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4191g00094 184 CDD DnaJ 55 113 IPR001623 -
Pral4191g00094 184 PRINTS DnaJ domain signature 58 76 IPR001623 -
Pral4191g00094 184 PRINTS DnaJ domain signature 76 91 IPR001623 -
Pral4191g00094 184 PRINTS DnaJ domain signature 96 116 IPR001623 -
Pral4191g00094 184 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Pral4191g00094 184 Gene3D DnaJ domain 40 151 IPR036869 -
Pral4191g00094 184 SMART dnaj_3 54 116 IPR001623 -
Pral4191g00094 184 Pfam DnaJ domain 55 121 IPR001623 -
Pral4191g00094 184 MobiDBLite consensus disorder prediction 156 184 - -
Pral4191g00094 184 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Pral4191g00094 184 SUPERFAMILY Chaperone J-domain 51 125 IPR036869 -
Pral4191g00094 184 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 29 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4191g00094 Pral-Chr4191 1361880 1362434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4191g00094 57 121 C2H2 Transcription Factor Family AT1G74250 41.791 1.04e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4191g00094 - - gmx:100811478 164.466