LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4191g00059	ATGGCGCTTTCGATTTCAACTCTGAACCATTTCGCATCCACACAACTCAAATGCTTTCCTTCCAACTTCACCATTCTCGCCTCCTCCTTTTCCTATCTTGTTCCTTCTTCTGCCTCCTCTGCCTTCTCGCCGAGGAGATTTTCTGCGCTGGCCATTCCTAAACGCTGTCGTTTCCGACGCGTTTCTGCTGCCTCTGCTGCTTCTGGAGATGACGATTCCCGACGGGCTGGTGAACTTTCGTCCCTCTCACCTGAAGTTGTTGTTCTCAATGTTGAGGGTATGATGTGCGAGGGATGTGCAGATAGTGTGAAAAAGCTTCTGGAGAGTCGACCTCAAGTATCATCTGCTAGCGTAAATCTGACAGAAAAACTAGCAACATTTTGGCCAGCACCTGAAGCAAAAACTGAATCAAATTGGCATAATAAATTAGGAGGTGGACTTGCAGAGCATTTAACAAACTGCGGCTTCAAGCCTAGCCTTCAAGGTCAGGAAGATGGAGACTGA	504	0.4762	MALSISTLNHFASTQLKCFPSNFTILASSFSYLVPSSASSAFSPRRFSALAIPKRCRFRRVSAASAASGDDDSRRAGELSSLSPEVVVLNVEGMMCEGCADSVKKLLESRPQVSSASVNLTEKLATFWPAPEAKTESNWHNKLGGGLAEHLTNCGFKPSLQGQEDGD	167

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4191g00059	167	Pfam	Heavy-metal-associated domain	88	135	IPR006121	GO:0046872
	Pral4191g00059	167	SUPERFAMILY	HMA, heavy metal-associated domain	85	138	IPR036163	GO:0046872
	Pral4191g00059	167	ProSiteProfiles	Heavy-metal-associated domain profile.	85	159	IPR006121	GO:0046872
	Pral4191g00059	167	Gene3D	-	85	164	-	-
	Pral4191g00059	167	CDD	HMA	88	159	IPR006121	GO:0046872
	Pral4191g00059	167	FunFam	Copper-transporting ATPase PAA1, chloroplastic	85	160	-	-
	Pral4191g00059	167	ProSitePatterns	Heavy-metal-associated domain.	91	120	IPR017969	GO:0046872

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4191g00059	Pral-Chr4191	842725	845468	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4191g00059	83	157	Primary Pumps ATPases	AT4G33520	58.667	3.35e-27	100

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4191g00059	K17686		-	qsa:O6P43_012334	115.546

Showing 1 to 1 of 1 entries