Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4191g00015 ATGGCTTCCCTTCATTATCCTCCACGCCCATCTGGGCTAGAGATTGAAACGACGAGGATAGATGAAGAAGAAGCATCAAGCGGTCCGAAGAAGAAGAAGAAGAGTGATGACGTTATTGATGGGGGAGAAGAGAAGGGGATATGGCTGACGTGGAAGGATGTGTGGGTGAGGGCTTCTTCAAGTGGGAGGAAGAAGAATAAGAAGAAGAAGAAGAAGAAAGGGATTAATGGAAGCAGAACAATACTGGAAGGTCTCACTGGTTATGTCAAACCCGGTCAGCTTTTGGCCATCATGGGTCCTTCTGGCTGTGGCAAGTCCACTCTTCTGGATACTTTAGCAGGGAGATTAGGTCCAAAAACAAGGCAGGCAGGGGAGATTCTTATTAACGGCCACAAACAAGTACTCGCCTATGGGACCTCGGCATATGTGACACAAGATGACGCTTTGCTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCAGCTCAGCTTCAATTACCAGACACAATGTCAAAGGAAGAGAAAAAGGAGAGAGCCGAGTTCACAATAAGAGAAATGGGTCTTCAAGACGCCATTAACACCAGAATTGGAGGTTGGGGTTGTAAGGGAATCAGTGGAGGCCAAAAGAGGAGAGTGAGTATTTGTATAGAGATCCTGACACGTCCAAGACTTCTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTCATGAGCAGAATCGCCAGCCTTGATCGAAAGGATGGGATTCAGAGGACCATTATTGCGTCTATTCATCAACCTAGTACTGAAGTCTTTCAGCTTTTTGATAATCTGTGTCTTCTTTCTTCCGGAAGAACTGTGTTCTTTGGTCCTATTTCTGCAGCAAGTGAGTTCTTTGCTTCAAATGGATTTCCTTGTCCTGCTGTCCAGAATCCGTCCGATCATTTCTTGAAAACTATAAACAAGGATTTTGATGATCAGGACATTGAATTGGGCTTCCCTGATCCTGAAAGGAAACCTACAGAAGAAGCAATAGAAATGCTTGTGAAATCATACAAGTCTTCTAATTTCAACCAACAAGTTCAAGCAGAAGTAGCAGCATTATCTGCACAGGAAAGTGGAATGGTGGTGGAGAAGAAGAAAAGAACGCATGCAAGCTTCCCTACTCAGTGCATTGTTCTTACAAAGAGATCATTCTTGAACATGCGTCGTGATTTAGGCTATTACTGGTTACGCCTTATCATATACATCGCTGTGGCGCTAGGTTTGGCCACCGTCTTCTACGATTTGGGCATGAGCACCGTGTCTATTCAAGATAGAGGTGGACTGCTTGCCTTTGTGTCCTCCTTCATAACTTTCATGACCATTGGTGGCTTCCCTTCCTTTGTGGAAGAGATGAAGGTATTTGGAAGGGAAAGGCTAAATGGGCACTATGGAGTGATAGCGTATGTGATAGGGAACACCTTATCTTCGATCCCATATCTATTACTCGTCACTGTCATTCCGGGAGCCATAGCCTATTACCTCCCAGGCCTTCAAAATTCTGCTGAACACTTTATCTTCTTCTGCTGTGTCCTATTTTCATGTCTGATGTTAGTTGAAAGCCTGATGATGATAGTGGCTAGCATCGTCCCTAACTTCCTCATGGGAATTATAACCGGTGCTGGTCTTCAAGGCATCATGATCCTCGCAGGAGGCTTCTTCAGATTGCCTAATGACCTTCCCAGAATCTTTTGGAAGTATCCTCTCTATTACATAGCCTTCCATAGATACGCCTACCAAGGACTGTTCAAGAACGAGTTTGAAGGACTGAGATTTGGTAATTTAAGTGGGGAAGAGATTCTGAGAAACAAATGGGAAGTTAACATGAGCTATTCTAAGTGGGTTGATCTTGCCATTCTTCTGGGGATGATCATTGTGTATAGAATTCTATTCTTGGTGATCATAAAGGGCACTGAGAAGATGAAGCCTTTAGTTGCTTCTTTGCTTAGCATTCAAGTCATAGCGAATCCAAAATGCTACTCCTTTAGGCGTGAATGGACTGCATAA 2049 0.4407 MASLHYPPRPSGLEIETTRIDEEEASSGPKKKKKSDDVIDGGEEKGIWLTWKDVWVRASSSGRKKNKKKKKKKGINGSRTILEGLTGYVKPGQLLAIMGPSGCGKSTLLDTLAGRLGPKTRQAGEILINGHKQVLAYGTSAYVTQDDALLTTLTVGEAVYYSAQLQLPDTMSKEEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVFFGPISAASEFFASNGFPCPAVQNPSDHFLKTINKDFDDQDIELGFPDPERKPTEEAIEMLVKSYKSSNFNQQVQAEVAALSAQESGMVVEKKKRTHASFPTQCIVLTKRSFLNMRRDLGYYWLRLIIYIAVALGLATVFYDLGMSTVSIQDRGGLLAFVSSFITFMTIGGFPSFVEEMKVFGRERLNGHYGVIAYVIGNTLSSIPYLLLVTVIPGAIAYYLPGLQNSAEHFIFFCCVLFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMILAGGFFRLPNDLPRIFWKYPLYYIAFHRYAYQGLFKNEFEGLRFGNLSGEEILRNKWEVNMSYSKWVDLAILLGMIIVYRILFLVIIKGTEKMKPLVASLLSIQVIANPKCYSFRREWTA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4191g00015 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 56 308 IPR003439 GO:0005524
Pral4191g00015 682 Gene3D - 66 397 IPR027417 -
Pral4191g00015 682 FunFam ABC transporter G family member 11 47 351 - -
Pral4191g00015 682 Pfam ABC-2 type transporter 389 601 IPR013525 GO:0016020|GO:0140359
Pral4191g00015 682 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Pral4191g00015 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 297 IPR027417 -
Pral4191g00015 682 SMART AAA_5 91 285 IPR003593 GO:0016887
Pral4191g00015 682 MobiDBLite consensus disorder prediction 1 39 - -
Pral4191g00015 682 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Pral4191g00015 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 37 663 - -
Pral4191g00015 682 MobiDBLite consensus disorder prediction 15 39 - -
Pral4191g00015 682 Pfam ABC-2 type transporter 265 371 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4191g00015 Pral-Chr4191 132984 137748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4191g00015 81 269 Calmodulin-binding Proteins AT2G36910 31.633 6.02e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4191g00015 K05681 - gmx:100813462 947.192